Gene annotation
Orthologs (automatic annotation)
JBrowse
Expression pattern by RNA-Seq analysis
FPKM plot
Find similar expressed genes
Top 20 genes with similar expressed profiles
Rank
Gene
Function
KEGG orthology
1
Sobic.003G349400
expressed protein
-
2
Sobic.010G158400
zinc finger, C3HC4 type domain containing protein, expressed
-
3
Sobic.009G032900
peroxidase precursor, putative, expressed
K00430 : peroxidase
4
Sobic.005G216700
plant protein of unknown function domain containing protein, expressed
-
5
Sobic.002G068000
expressed protein
-
6
Sobic.004G351200
-(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed
K09872 : aquaporin PIP
7
Sobic.010G139100
serine/threonine-protein kinase, putative, expressed
-
8
Sobic.006G150100
Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed
K09872 : aquaporin PIP
9
Sobic.010G234500
O-methyltransferase, putative, expressed
-
10
Sobic.006G100501
-
-
11
Sobic.003G185300
dynein light chain type 1 domain containing protein, expressed
K10418 : dynein light chain LC8-type
12
Sobic.003G426200
glutathione S-transferase, putative, expressed
K00799 : GST, glutathione S-transferase
13
Sobic.002G003700
peroxidase precursor, putative, expressed
K00430 : peroxidase
14
Sobic.009G259800
zinc finger, C3HC4 type domain containing protein, expressed
K10664 : E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
15
Sobic.003G269900
OsSub12 - Putative Subtilisin homologue, expressed
-
16
Sobic.005G080600
RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed
-
17
Sobic.005G127400
expressed protein
-
18
Sobic.003G182200
1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed
-
19
Sobic.003G426500
glutathione S-transferase, putative, expressed
K00799 : GST, glutathione S-transferase
20
Sobic.010G066800
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed
-
Gene co-expression network
sample
Sobic002G085800
Sobic002G085800
Sobic003G349400
Sobic003G349400
Sobic002G085800--Sobic003G349400
Sobic010G158400
Sobic010G158400
Sobic002G085800--Sobic010G158400
Sobic009G032900
Sobic009G032900
Sobic002G085800--Sobic009G032900
Sobic005G216700
Sobic005G216700
Sobic002G085800--Sobic005G216700
Sobic002G068000
Sobic002G068000
Sobic002G085800--Sobic002G068000
Sobic004G351200
Sobic004G351200
Sobic002G085800--Sobic004G351200
Sobic010G139100
Sobic010G139100
Sobic002G085800--Sobic010G139100
Sobic006G150100
Sobic006G150100
Sobic002G085800--Sobic006G150100
Sobic010G234500
Sobic010G234500
Sobic002G085800--Sobic010G234500
Sobic005G127400
Sobic005G127400
Sobic003G349400--Sobic005G127400
Sobic003G349400--Sobic010G234500
Sobic003G349400--Sobic002G068000
Sobic003G349400--Sobic006G150100
Sobic002G255000
Sobic002G255000
Sobic003G349400--Sobic002G255000
Sobic003G064800
Sobic003G064800
Sobic003G349400--Sobic003G064800
Sobic010G066800
Sobic010G066800
Sobic003G349400--Sobic010G066800
Sobic004G110700
Sobic004G110700
Sobic003G349400--Sobic004G110700
Sobic007G100700
Sobic007G100700
Sobic003G349400--Sobic007G100700
Sobic010G158400--Sobic002G068000
Sobic010G158400--Sobic009G032900
Sobic003G426500
Sobic003G426500
Sobic010G158400--Sobic003G426500
Sobic010G158400--Sobic003G349400
Sobic010G158400--Sobic004G351200
Sobic003G185300
Sobic003G185300
Sobic010G158400--Sobic003G185300
Sobic010G158400--Sobic005G216700
Sobic009G259800
Sobic009G259800
Sobic010G158400--Sobic009G259800
Sobic010G158400--Sobic006G150100
Sobic009G032900--Sobic002G068000
Sobic009G032900--Sobic004G351200
Sobic009G032900--Sobic005G216700
Sobic009G032900--Sobic010G158400
Sobic002G334000
Sobic002G334000
Sobic009G032900--Sobic002G334000
Sobic009G032900--Sobic010G139100
Sobic007G206800
Sobic007G206800
Sobic009G032900--Sobic007G206800
Sobic003G046700
Sobic003G046700
Sobic009G032900--Sobic003G046700
Sobic003G269900
Sobic003G269900
Sobic009G032900--Sobic003G269900
Sobic005G216700--Sobic004G351200
Sobic005G216700--Sobic009G032900
Sobic005G216700--Sobic010G139100
Sobic005G216700--Sobic002G068000
Sobic005G216700--Sobic002G334000
Sobic005G216700--Sobic007G206800
Sobic005G216700--Sobic010G158400
Sobic005G080600
Sobic005G080600
Sobic005G216700--Sobic005G080600
Sobic005G216700--Sobic003G046700
Sobic002G068000--Sobic009G032900
Sobic002G068000--Sobic003G349400
Sobic002G068000--Sobic010G158400
Sobic002G068000--Sobic010G234500
Sobic002G068000--Sobic005G080600
Sobic002G068000--Sobic009G259800
Sobic002G068000--Sobic003G426500
Sobic002G068000--Sobic005G216700
Sobic002G068000--Sobic010G066800
Sobic004G351200--Sobic005G216700
Sobic004G351200--Sobic009G032900
Sobic004G351200--Sobic010G139100
Sobic004G351200--Sobic002G334000
Sobic004G351200--Sobic002G068000
Sobic004G351200--Sobic010G158400
Sobic004G351200--Sobic007G206800
Sobic002G392100
Sobic002G392100
Sobic004G351200--Sobic002G392100
Sobic004G351200--Sobic006G150100
Sobic010G139100--Sobic009G032900
Sobic010G139100--Sobic004G351200
Sobic010G139100--Sobic003G269900
Sobic010G139100--Sobic005G216700
Sobic006G135500
Sobic006G135500
Sobic010G139100--Sobic006G135500
Sobic004G323000
Sobic004G323000
Sobic010G139100--Sobic004G323000
Sobic010G115000
Sobic010G115000
Sobic010G139100--Sobic010G115000
Sobic010G174100
Sobic010G174100
Sobic010G139100--Sobic010G174100
Sobic010G139100--Sobic010G158400
Sobic006G150100--Sobic003G349400
Sobic006G150100--Sobic005G127400
Sobic002G003700
Sobic002G003700
Sobic006G150100--Sobic002G003700
Sobic006G150100--Sobic004G110700
Sobic006G170600
Sobic006G170600
Sobic006G150100--Sobic006G170600
Sobic006G150100--Sobic002G068000
Sobic006G150100--Sobic010G234500
Sobic006G150100--Sobic010G158400
Sobic006G225500
Sobic006G225500
Sobic006G150100--Sobic006G225500
Sobic010G234500--Sobic003G349400
Sobic010G234500--Sobic003G064800
Sobic010G234500--Sobic005G127400
Sobic010G234500--Sobic002G255000
Sobic001G238200
Sobic001G238200
Sobic010G234500--Sobic001G238200
Sobic009G186500
Sobic009G186500
Sobic010G234500--Sobic009G186500
Sobic010G234500--Sobic002G068000
Sobic004G306900
Sobic004G306900
Sobic010G234500--Sobic004G306900
Sobic006G019700
Sobic006G019700
Sobic010G234500--Sobic006G019700
Octagon: transcription factors