Gene annotation
Transcriptome id Sobic.002G050100.2
Synonym Sb02g004200
Functional annotation LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1W0W287
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05450 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g57980.1 : LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a045143
Brachypodium -
Barley HORVU6Hr1G082080.2 , HORVU6Hr1G082080.3 , HORVU6Hr1G082080.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.005G122800 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
5 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
6 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
7 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
9 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
10 Sobic.005G145100 phospholipase A2, putative, expressed -
11 Sobic.002G028500 app1, putative, expressed -
12 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
13 Sobic.002G409000 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.001G413700 white-brown complex homolog protein, putative, expressed -
15 Sobic.009G253300 Myb family transcription factor(PubMedID : 26320239)@Myb transcription factor, putative, expressed -
16 Sobic.002G244300 fasciclin domain containing protein, expressed -
17 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.002G030800 app1, putative, expressed -
20 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic002G050100 Sobic002G050100 Sobic003G341500 Sobic003G341500 Sobic002G050100--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic002G050100--Sobic004G266700 Sobic001G144800 Sobic001G144800 Sobic002G050100--Sobic001G144800 Sobic005G122800 Sobic005G122800 Sobic002G050100--Sobic005G122800 Sobic009G008800 Sobic009G008800 Sobic002G050100--Sobic009G008800 Sobic003G443200 Sobic003G443200 Sobic002G050100--Sobic003G443200 Sobic005G127200 Sobic005G127200 Sobic002G050100--Sobic005G127200 Sobic001G068500 Sobic001G068500 Sobic002G050100--Sobic001G068500 Sobic003G239100 Sobic003G239100 Sobic002G050100--Sobic003G239100 Sobic003G341500--Sobic001G144800 Sobic003G341500--Sobic001G068500 Sobic003G341500--Sobic004G266700 Sobic001G059600 Sobic001G059600 Sobic003G341500--Sobic001G059600 Sobic003G368100 Sobic003G368100 Sobic003G341500--Sobic003G368100 Sobic003G341500--Sobic005G127200 Sobic004G231700 Sobic004G231700 Sobic003G341500--Sobic004G231700 Sobic002G050300 Sobic002G050300 Sobic003G341500--Sobic002G050300 Sobic010G093300 Sobic010G093300 Sobic003G341500--Sobic010G093300 Sobic004G266700--Sobic005G127200 Sobic004G266700--Sobic003G341500 Sobic004G266700--Sobic001G144800 Sobic004G266700--Sobic001G068500 Sobic004G266700--Sobic010G093300 Sobic004G266700--Sobic009G008800 Sobic004G266700--Sobic003G368100 Sobic004G266700--Sobic003G239100 Sobic004G266700--Sobic001G059600 Sobic001G144800--Sobic003G341500 Sobic001G144800--Sobic004G266700 Sobic003G206700 Sobic003G206700 Sobic001G144800--Sobic003G206700 Sobic001G059500 Sobic001G059500 Sobic001G144800--Sobic001G059500 Sobic001G144800--Sobic001G068500 Sobic001G144800--Sobic003G368100 Sobic001G144800--Sobic009G008800 Sobic001G144800--Sobic001G059600 Sobic001G144800--Sobic005G127200 Sobic005G122800--Sobic003G443200 Sobic005G122800--Sobic002G050100 Sobic005G122800--Sobic004G266700 Sobic005G122800--Sobic005G127200 Sobic005G145100 Sobic005G145100 Sobic005G122800--Sobic005G145100 Sobic005G122800--Sobic003G341500 Sobic007G091900 Sobic007G091900 Sobic005G122800--Sobic007G091900 Sobic005G122800--Sobic003G239100 Sobic010G133932 Sobic010G133932 Sobic005G122800--Sobic010G133932 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic003G352700 Sobic003G352700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic009G008800--Sobic003G082700 Sobic001G046800 Sobic001G046800 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic009G008800--Sobic001G144800 Sobic009G008800--Sobic003G206700 Sobic003G443200--Sobic005G122800 Sobic003G443200--Sobic002G050100 Sobic009G253300 Sobic009G253300 Sobic003G443200--Sobic009G253300 Sobic003G443200--Sobic003G239100 Sobic009G033400 Sobic009G033400 Sobic003G443200--Sobic009G033400 Sobic003G443200--Sobic005G145100 Sobic003G443200--Sobic003G082700 Sobic003G443200--Sobic009G008800 Sobic003G443200--Sobic007G091900 Sobic005G127200--Sobic010G093300 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic002G030800 Sobic002G030800 Sobic005G127200--Sobic002G030800 Sobic005G127200--Sobic003G341500 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic001G413700 Sobic001G413700 Sobic005G127200--Sobic001G413700 Sobic005G127200--Sobic003G368100 Sobic001G068500--Sobic003G368100 Sobic001G068500--Sobic003G341500 Sobic001G068500--Sobic002G050300 Sobic001G068500--Sobic005G127200 Sobic001G068500--Sobic010G093300 Sobic001G068500--Sobic004G266700 Sobic001G068500--Sobic001G059500 Sobic001G068500--Sobic001G059600 Sobic001G068500--Sobic001G144800 Sobic003G239100--Sobic003G082700 Sobic003G239100--Sobic009G008800 Sobic003G239100--Sobic003G352700 Sobic003G239100--Sobic005G145100 Sobic003G239100--Sobic004G266700 Sobic003G239100--Sobic005G127200 Sobic002G053900 Sobic002G053900 Sobic003G239100--Sobic002G053900 Sobic003G239100--Sobic002G030800 Sobic001G484000 Sobic001G484000 Sobic003G239100--Sobic001G484000
Octagon: transcription factors


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