Gene annotation
Transcriptome id Sobic.009G253300.1,Sobic.009G253300.2
Synonym Sb09g030390
Functional annotation Myb family transcription factor (PubMedID : 26320239)
Myb transcription factor, putative, expressed
UniProt A0A1B6PA60 , A0A1Z5R504
Pfam PF00249
Panther DB PTHR12374 PTHR12374:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47390 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os05g51160.1,LOC_Os01g41900.1 : Myb transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023494 , Zm00025a043800 , Zm00025a035798 , Zm00025a023038 , Zm00025a003384
Brachypodium KQJ97811 , KQK03131
Barley HORVU1Hr1G055900.4 , HORVU1Hr1G055900.5 , HORVU1Hr1G055900.6 , HORVU1Hr1G055900.7 , HORVU1Hr1G055900.1 , HORVU1Hr1G073940.1 , HORVU1Hr1G073940.2 , HORVU1Hr1G073940.3 , HORVU1Hr1G073940.4 , HORVU1Hr1G073940.5 , HORVU1Hr1G073940.6
Wheat TraesCS3D02G056100 , TraesCS1D02G220500 , TraesCS3D02G109100 , TraesCS7A02G036100 , TraesCS3B02G399300 , TraesCS7D02G032700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G147400 dirigent, putative, expressed -
2 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
3 Sobic.002G053900 Cupin domain containing protein, expressed -
4 Sobic.002G050100 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.009G033400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
7 Sobic.002G028500 app1, putative, expressed -
8 Sobic.005G145100 phospholipase A2, putative, expressed -
9 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
10 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
11 Sobic.002G244300 fasciclin domain containing protein, expressed -
12 Sobic.001G208600 receptor kinase like protein, putative, expressed -
13 Sobic.007G008400 - -
14 Sobic.001G190500 dirigent, putative, expressed -
15 Sobic.005G122800 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
16 Sobic.010G162400 reticuline oxidase-like protein precursor, putative, expressed -
17 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
19 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G253300 Sobic009G253300 Sobic004G147400 Sobic004G147400 Sobic009G253300--Sobic004G147400 Sobic003G443200 Sobic003G443200 Sobic009G253300--Sobic003G443200 Sobic002G053900 Sobic002G053900 Sobic009G253300--Sobic002G053900 Sobic002G050100 Sobic002G050100 Sobic009G253300--Sobic002G050100 Sobic009G033400 Sobic009G033400 Sobic009G253300--Sobic009G033400 Sobic009G072800 Sobic009G072800 Sobic009G253300--Sobic009G072800 Sobic002G028500 Sobic002G028500 Sobic009G253300--Sobic002G028500 Sobic005G145100 Sobic005G145100 Sobic009G253300--Sobic005G145100 Sobic009G008800 Sobic009G008800 Sobic009G253300--Sobic009G008800 Sobic004G147400--Sobic009G253300 Sobic007G008400 Sobic007G008400 Sobic004G147400--Sobic007G008400 Sobic010G162400 Sobic010G162400 Sobic004G147400--Sobic010G162400 Sobic010G030100 Sobic010G030100 Sobic004G147400--Sobic010G030100 Sobic005G061700 Sobic005G061700 Sobic004G147400--Sobic005G061700 Sobic004G147400--Sobic002G050100 Sobic006G009900 Sobic006G009900 Sobic004G147400--Sobic006G009900 Sobic004G147400--Sobic002G053900 Sobic004G025200 Sobic004G025200 Sobic004G147400--Sobic004G025200 Sobic005G122800 Sobic005G122800 Sobic003G443200--Sobic005G122800 Sobic003G443200--Sobic002G050100 Sobic003G443200--Sobic009G253300 Sobic003G239100 Sobic003G239100 Sobic003G443200--Sobic003G239100 Sobic003G443200--Sobic009G033400 Sobic003G443200--Sobic005G145100 Sobic003G082700 Sobic003G082700 Sobic003G443200--Sobic003G082700 Sobic003G443200--Sobic009G008800 Sobic007G091900 Sobic007G091900 Sobic003G443200--Sobic007G091900 Sobic001G046800 Sobic001G046800 Sobic002G053900--Sobic001G046800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic002G053900--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic002G053900--Sobic010G047600 Sobic001G484000 Sobic001G484000 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic009G215000 Sobic009G215000 Sobic002G053900--Sobic009G215000 Sobic002G053900--Sobic003G239100 Sobic003G341500 Sobic003G341500 Sobic002G050100--Sobic003G341500 Sobic004G266700 Sobic004G266700 Sobic002G050100--Sobic004G266700 Sobic001G144800 Sobic001G144800 Sobic002G050100--Sobic001G144800 Sobic002G050100--Sobic005G122800 Sobic002G050100--Sobic009G008800 Sobic002G050100--Sobic003G443200 Sobic005G127200 Sobic005G127200 Sobic002G050100--Sobic005G127200 Sobic001G068500 Sobic001G068500 Sobic002G050100--Sobic001G068500 Sobic002G050100--Sobic003G239100 Sobic001G334900 Sobic001G334900 Sobic009G033400--Sobic001G334900 Sobic009G033400--Sobic003G443200 Sobic009G033400--Sobic009G253300 Sobic010G228100 Sobic010G228100 Sobic009G033400--Sobic010G228100 Sobic001G345900 Sobic001G345900 Sobic009G033400--Sobic001G345900 Sobic001G012200 Sobic001G012200 Sobic009G033400--Sobic001G012200 Sobic002G347300 Sobic002G347300 Sobic009G033400--Sobic002G347300 Sobic001G012400 Sobic001G012400 Sobic009G033400--Sobic001G012400 Sobic001G012300 Sobic001G012300 Sobic009G033400--Sobic001G012300 Sobic009G072800--Sobic001G190500 Sobic009G072800--Sobic002G053900 Sobic009G072800--Sobic001G046800 Sobic009G072800--Sobic009G215000 Sobic009G072800--Sobic001G068500 Sobic002G311501 Sobic002G311501 Sobic009G072800--Sobic002G311501 Sobic001G261460 Sobic001G261460 Sobic009G072800--Sobic001G261460 Sobic009G072800--Sobic009G008800 Sobic003G250700 Sobic003G250700 Sobic009G072800--Sobic003G250700 Sobic002G028500--Sobic005G145100 Sobic001G129600 Sobic001G129600 Sobic002G028500--Sobic001G129600 Sobic002G028500--Sobic001G144800 Sobic004G290300 Sobic004G290300 Sobic002G028500--Sobic004G290300 Sobic002G028500--Sobic004G266700 Sobic001G208600 Sobic001G208600 Sobic002G028500--Sobic001G208600 Sobic002G028500--Sobic002G050100 Sobic001G140800 Sobic001G140800 Sobic002G028500--Sobic001G140800 Sobic002G028500--Sobic003G239100 Sobic005G145100--Sobic002G028500 Sobic005G145100--Sobic001G208600 Sobic005G145100--Sobic003G239100 Sobic005G145100--Sobic004G290300 Sobic005G145100--Sobic001G129600 Sobic005G145100--Sobic004G266700 Sobic005G145100--Sobic001G140800 Sobic001G388000 Sobic001G388000 Sobic005G145100--Sobic001G388000 Sobic005G145100--Sobic001G144800 Sobic001G059500 Sobic001G059500 Sobic009G008800--Sobic001G059500 Sobic009G008800--Sobic010G106700 Sobic003G352700 Sobic003G352700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic009G008800--Sobic003G082700 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic009G008800--Sobic001G144800 Sobic003G206700 Sobic003G206700 Sobic009G008800--Sobic003G206700
Octagon: transcription factors


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