Gene annotation
Transcriptome id Sobic.010G162400.1
Synonym
Functional annotation reticuline oxidase-like protein precursor, putative, expressed
UniProt A0A194YKM3
Pfam PF08031 PF01565
Panther DB PTHR32448 PTHR32448:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G20820 : FAD-binding Berberine family protein
RAP-DB (Rice) LOC_Os06g35560.1 : reticuline oxidase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051104 , Zm00025a020032
Brachypodium KQJ98133 , KQK18048
Barley HORVU1Hr1G092680.2 , HORVU1Hr1G092680.1
Wheat TraesCS1A02G424100 , TraesCS7D02G369100 , TraesCS7D02G369200
Populus -


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cDNA sequences
Sobic.010G162400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
2 Sobic.004G147400 dirigent, putative, expressed -
3 Sobic.001G161601 - K14484: auxin-responsive protein IAA
4 Sobic.009G253300 Myb family transcription factor(PubMedID : 26320239)@Myb transcription factor, putative, expressed -
5 Sobic.007G141200 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@"coniferylaldehyde dehydrogenase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Higher affinity for caffeoyl-CoA or p-coumaroyl-CoA than for feruloyl-CoA, but significantly higher activity for the latter substrate, "(PubMedID : 27956488)@cinnamoyl-CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
6 Sobic.002G244300 fasciclin domain containing protein, expressed -
7 Sobic.001G012400 "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed K13030: cyanohydrin beta-glucosyltransferase
8 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
10 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase
11 Sobic.009G033400 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
13 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
14 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
15 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
17 Sobic.001G532300 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.002G053900 Cupin domain containing protein, expressed -
19 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.001G012300 "similar to Cytochrome P450 79A1, up-regulated under drought stress "(PubMedID : 24655390)@similar to Cytochrome P450 79A1(PubMedID : 24655390)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@Tyrosine N-monooxygenase(PubMedID : 27964718)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 21880107)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 26361733)@cytochrome P450, putative, expressed K13027: tyrosine N-monooxygenase


Gene co-expression network
sample Sobic010G162400 Sobic010G162400 Sobic001G170700 Sobic001G170700 Sobic010G162400--Sobic001G170700 Sobic004G147400 Sobic004G147400 Sobic010G162400--Sobic004G147400 Sobic001G161601 Sobic001G161601 Sobic010G162400--Sobic001G161601 Sobic009G253300 Sobic009G253300 Sobic010G162400--Sobic009G253300 Sobic007G141200 Sobic007G141200 Sobic010G162400--Sobic007G141200 Sobic002G244300 Sobic002G244300 Sobic010G162400--Sobic002G244300 Sobic001G012400 Sobic001G012400 Sobic010G162400--Sobic001G012400 Sobic001G012500 Sobic001G012500 Sobic010G162400--Sobic001G012500 Sobic002G347300 Sobic002G347300 Sobic010G162400--Sobic002G347300 Sobic001G170700--Sobic010G162400 Sobic002G073800 Sobic002G073800 Sobic001G170700--Sobic002G073800 Sobic010G074600 Sobic010G074600 Sobic001G170700--Sobic010G074600 Sobic005G155200 Sobic005G155200 Sobic001G170700--Sobic005G155200 Sobic001G170700--Sobic009G253300 Sobic001G502500 Sobic001G502500 Sobic001G170700--Sobic001G502500 Sobic004G328601 Sobic004G328601 Sobic001G170700--Sobic004G328601 Sobic001G170700--Sobic001G012500 Sobic002G388700 Sobic002G388700 Sobic001G170700--Sobic002G388700 Sobic004G147400--Sobic009G253300 Sobic007G008400 Sobic007G008400 Sobic004G147400--Sobic007G008400 Sobic004G147400--Sobic010G162400 Sobic010G030100 Sobic010G030100 Sobic004G147400--Sobic010G030100 Sobic005G061700 Sobic005G061700 Sobic004G147400--Sobic005G061700 Sobic002G050100 Sobic002G050100 Sobic004G147400--Sobic002G050100 Sobic006G009900 Sobic006G009900 Sobic004G147400--Sobic006G009900 Sobic002G053900 Sobic002G053900 Sobic004G147400--Sobic002G053900 Sobic004G025200 Sobic004G025200 Sobic004G147400--Sobic004G025200 Sobic003G043700 Sobic003G043700 Sobic001G161601--Sobic003G043700 Sobic001G161500 Sobic001G161500 Sobic001G161601--Sobic001G161500 Sobic002G350700 Sobic002G350700 Sobic001G161601--Sobic002G350700 Sobic001G059700 Sobic001G059700 Sobic001G161601--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic001G161601--Sobic010G085800 Sobic004G318700 Sobic004G318700 Sobic001G161601--Sobic004G318700 Sobic009G232100 Sobic009G232100 Sobic001G161601--Sobic009G232100 Sobic001G112100 Sobic001G112100 Sobic001G161601--Sobic001G112100 Sobic002G213600 Sobic002G213600 Sobic001G161601--Sobic002G213600 Sobic009G253300--Sobic004G147400 Sobic003G443200 Sobic003G443200 Sobic009G253300--Sobic003G443200 Sobic009G253300--Sobic002G053900 Sobic009G253300--Sobic002G050100 Sobic009G033400 Sobic009G033400 Sobic009G253300--Sobic009G033400 Sobic009G072800 Sobic009G072800 Sobic009G253300--Sobic009G072800 Sobic002G028500 Sobic002G028500 Sobic009G253300--Sobic002G028500 Sobic005G145100 Sobic005G145100 Sobic009G253300--Sobic005G145100 Sobic009G008800 Sobic009G008800 Sobic009G253300--Sobic009G008800 Sobic003G238600 Sobic003G238600 Sobic007G141200--Sobic003G238600 Sobic010G115700 Sobic010G115700 Sobic007G141200--Sobic010G115700 Sobic002G365500 Sobic002G365500 Sobic007G141200--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic007G141200--Sobic004G071000 Sobic007G141200--Sobic010G162400 Sobic007G141200--Sobic002G244300 Sobic002G409000 Sobic002G409000 Sobic007G141200--Sobic002G409000 Sobic002G365801 Sobic002G365801 Sobic007G141200--Sobic002G365801 Sobic002G415000 Sobic002G415000 Sobic007G141200--Sobic002G415000 Sobic003G368100 Sobic003G368100 Sobic002G244300--Sobic003G368100 Sobic003G206700 Sobic003G206700 Sobic002G244300--Sobic003G206700 Sobic002G244300--Sobic009G008800 Sobic009G088900 Sobic009G088900 Sobic002G244300--Sobic009G088900 Sobic001G046800 Sobic001G046800 Sobic002G244300--Sobic001G046800 Sobic010G083400 Sobic010G083400 Sobic002G244300--Sobic010G083400 Sobic001G261460 Sobic001G261460 Sobic002G244300--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic002G244300--Sobic010G047600 Sobic008G055100 Sobic008G055100 Sobic002G244300--Sobic008G055100 Sobic001G012400--Sobic002G347300 Sobic001G012200 Sobic001G012200 Sobic001G012400--Sobic001G012200 Sobic001G012400--Sobic001G012500 Sobic001G012600 Sobic001G012600 Sobic001G012400--Sobic001G012600 Sobic001G035600 Sobic001G035600 Sobic001G012400--Sobic001G035600 Sobic001G012300 Sobic001G012300 Sobic001G012400--Sobic001G012300 Sobic001G334900 Sobic001G334900 Sobic001G012400--Sobic001G334900 Sobic005G096101 Sobic005G096101 Sobic001G012400--Sobic005G096101 Sobic009G221900 Sobic009G221900 Sobic001G012400--Sobic009G221900 Sobic001G012500--Sobic001G012400 Sobic001G012500--Sobic002G347300 Sobic001G012500--Sobic001G012600 Sobic002G338400 Sobic002G338400 Sobic001G012500--Sobic002G338400 Sobic001G012500--Sobic001G035600 Sobic001G012500--Sobic001G012200 Sobic001G012500--Sobic001G012300 Sobic003G340800 Sobic003G340800 Sobic001G012500--Sobic003G340800 Sobic009G232200 Sobic009G232200 Sobic001G012500--Sobic009G232200 Sobic002G347300--Sobic001G012400 Sobic002G347300--Sobic001G012600 Sobic002G347300--Sobic009G232200 Sobic002G347300--Sobic001G334900 Sobic001G208600 Sobic001G208600 Sobic002G347300--Sobic001G208600 Sobic002G347300--Sobic009G221900 Sobic003G099166 Sobic003G099166 Sobic002G347300--Sobic003G099166 Sobic002G347300--Sobic002G053900 Sobic002G347300--Sobic002G338400
Octagon: transcription factors


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