Gene annotation
Transcriptome id Sobic.001G161601.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5V2
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF30
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT3G04730 : indoleacetic acid-induced protein 16
RAP-DB (Rice) LOC_Os03g43400.1 : OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a023057 , Zm00025a004598 , Zm00025a023196 , Zm00025a047770 , Zm00025a045194 , Zm00025a035750 , Zm00025a042258
Brachypodium KQK02999 , KQK07226 , KQK17820 , KQK07228 , KQJ91157 , KQK07227 , KQK14081 , KQK14082 , KQK14083 , KQJ85960 , KQJ85961
Barley HORVU4Hr1G049130.13 , HORVU4Hr1G049130.12 , HORVU4Hr1G049130.11 , HORVU4Hr1G049130.10 , HORVU1Hr1G025670.5 , HORVU1Hr1G025670.4 , HORVU1Hr1G025670.7 , HORVU1Hr1G025670.1 , HORVU1Hr1G025670.3 , HORVU1Hr1G025670.2 , HORVU1Hr1G025670.9 , HORVU1Hr1G025670.8 , HORVU5Hr1G014300.5 , HORVU5Hr1G014300.4 , HORVU5Hr1G014300.6 , HORVU5Hr1G014300.1 , HORVU5Hr1G014300.3 , HORVU5Hr1G014300.2 , HORVU5Hr1G081180.1 , HORVU1Hr1G025670.6 , HORVU4Hr1G049130.5 , HORVU4Hr1G049130.4 , HORVU4Hr1G049130.7 , HORVU4Hr1G049130.6 , HORVU4Hr1G049130.1 , HORVU4Hr1G049130.3 , HORVU4Hr1G049130.2 , HORVU4Hr1G049130.9 , HORVU4Hr1G049130.8 , HORVU5Hr1G093580.6 , HORVU5Hr1G093580.7 , HORVU5Hr1G093580.4 , HORVU5Hr1G093580.5 , HORVU5Hr1G093580.2 , HORVU5Hr1G093580.3 , HORVU5Hr1G093580.1 , HORVU5Hr1G093580.8
Wheat TraesCS3D02G123400 , TraesCS5D02G323500 , TraesCS5A02G317200 , TraesCS5B02G058500 , TraesCS3A02G121300 , TraesCS3A02G121300 , TraesCS5D02G069300 , TraesCS5D02G388300 , TraesCS5D02G388300 , TraesCS5B02G381900 , TraesCS1D02G119500 , TraesCS1B02G138100 , TraesCS5B02G317800 , TraesCS5A02G058600 , TraesCS5A02G378300 , TraesCS5A02G378300 , TraesCS3B02G140700 , TraesCS1A02G118400 , TraesCS1A02G118400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G043700 expressed protein -
2 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
4 Sobic.001G059700 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
7 Sobic.009G232100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
8 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
9 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
10 Sobic.003G057600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G035300 expressed protein -
12 Sobic.001G304201 - -
13 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
16 Sobic.006G203700 EF hand family protein, putative, expressed -
17 Sobic.003G050200 embryo-specific 3, putative, expressed -
18 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
19 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic001G161601 Sobic001G161601 Sobic003G043700 Sobic003G043700 Sobic001G161601--Sobic003G043700 Sobic001G161500 Sobic001G161500 Sobic001G161601--Sobic001G161500 Sobic002G350700 Sobic002G350700 Sobic001G161601--Sobic002G350700 Sobic001G059700 Sobic001G059700 Sobic001G161601--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic001G161601--Sobic010G085800 Sobic004G318700 Sobic004G318700 Sobic001G161601--Sobic004G318700 Sobic009G232100 Sobic009G232100 Sobic001G161601--Sobic009G232100 Sobic001G112100 Sobic001G112100 Sobic001G161601--Sobic001G112100 Sobic002G213600 Sobic002G213600 Sobic001G161601--Sobic002G213600 Sobic003G043700--Sobic001G161601 Sobic004G042000 Sobic004G042000 Sobic003G043700--Sobic004G042000 Sobic003G043700--Sobic002G213600 Sobic001G111000 Sobic001G111000 Sobic003G043700--Sobic001G111000 Sobic003G016100 Sobic003G016100 Sobic003G043700--Sobic003G016100 Sobic003G043700--Sobic001G161500 Sobic003G219800 Sobic003G219800 Sobic003G043700--Sobic003G219800 Sobic009G035300 Sobic009G035300 Sobic003G043700--Sobic009G035300 Sobic003G316000 Sobic003G316000 Sobic003G043700--Sobic003G316000 Sobic001G416200 Sobic001G416200 Sobic001G161500--Sobic001G416200 Sobic004G349125 Sobic004G349125 Sobic001G161500--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G161500--Sobic001G302600 Sobic001G161500--Sobic004G318700 Sobic001G304100 Sobic001G304100 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic001G161500--Sobic009G035300 Sobic001G161500--Sobic002G213600 Sobic006G197100 Sobic006G197100 Sobic001G161500--Sobic006G197100 Sobic002G350700--Sobic001G161601 Sobic002G350700--Sobic001G059700 Sobic002G350700--Sobic010G085800 Sobic002G350700--Sobic001G112100 Sobic002G350700--Sobic009G232100 Sobic009G088900 Sobic009G088900 Sobic002G350700--Sobic009G088900 Sobic001G159900 Sobic001G159900 Sobic002G350700--Sobic001G159900 Sobic004G055100 Sobic004G055100 Sobic002G350700--Sobic004G055100 Sobic001G264700 Sobic001G264700 Sobic002G350700--Sobic001G264700 Sobic001G059700--Sobic010G085800 Sobic001G059700--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic001G059700--Sobic007G159450 Sobic001G238400 Sobic001G238400 Sobic001G059700--Sobic001G238400 Sobic001G059700--Sobic004G318700 Sobic001G310300 Sobic001G310300 Sobic001G059700--Sobic001G310300 Sobic003G053400 Sobic003G053400 Sobic001G059700--Sobic003G053400 Sobic004G297900 Sobic004G297900 Sobic001G059700--Sobic004G297900 Sobic008G005100 Sobic008G005100 Sobic001G059700--Sobic008G005100 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic009G109000 Sobic009G109000 Sobic010G085800--Sobic009G109000 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic010G085800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic004G318700--Sobic001G416200 Sobic004G318700--Sobic001G238400 Sobic004G318700--Sobic001G304100 Sobic004G318700--Sobic001G161500 Sobic004G318700--Sobic002G213600 Sobic009G188000 Sobic009G188000 Sobic004G318700--Sobic009G188000 Sobic001G237900 Sobic001G237900 Sobic004G318700--Sobic001G237900 Sobic004G318700--Sobic004G349125 Sobic004G202400 Sobic004G202400 Sobic004G318700--Sobic004G202400 Sobic009G232100--Sobic009G088900 Sobic001G049900 Sobic001G049900 Sobic009G232100--Sobic001G049900 Sobic009G232100--Sobic009G188000 Sobic009G232100--Sobic001G310300 Sobic009G232100--Sobic010G085800 Sobic001G361600 Sobic001G361600 Sobic009G232100--Sobic001G361600 Sobic002G396400 Sobic002G396400 Sobic009G232100--Sobic002G396400 Sobic009G232100--Sobic001G304100 Sobic009G232100--Sobic009G109000 Sobic001G112100--Sobic009G188000 Sobic004G295100 Sobic004G295100 Sobic001G112100--Sobic004G295100 Sobic001G112100--Sobic001G304100 Sobic001G112100--Sobic008G009400 Sobic006G172550 Sobic006G172550 Sobic001G112100--Sobic006G172550 Sobic001G112100--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic001G112100--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G112100--Sobic004G292900 Sobic006G235200 Sobic006G235200 Sobic001G112100--Sobic006G235200 Sobic002G213600--Sobic001G304100 Sobic002G213600--Sobic004G042000 Sobic002G213600--Sobic003G016100 Sobic003G319500 Sobic003G319500 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic002G213600--Sobic002G003800 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic001G304201 Sobic001G304201 Sobic002G213600--Sobic001G304201
Octagon: transcription factors


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