Gene annotation
Transcriptome id Sobic.003G057600.1
Synonym Sb03g004900
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XNK2
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30230 : -
RAP-DB (Rice) LOC_Os01g07150.1 : expressed protein
MaizeGDB (Corn) Zm00025a002045 , Zm00025a023332
Brachypodium KQK22085 , KQK02845
Barley HORVU4Hr1G055090.1 , HORVU3Hr1G088220.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G057600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G008300 expressed protein -
2 Sobic.003G360600 cytochrome P450, putative, expressed K15401: long-chain fatty acid omega-monooxygenase
3 Sobic.001G161601 - K14484: auxin-responsive protein IAA
4 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.001G395800 SMP-30/Gluconolaconase/LRE domain protein, putative, expressed -
6 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
8 Sobic.006G172550 - -
9 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
11 Sobic.006G172601 - -
12 Sobic.009G035300 expressed protein -
13 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
14 Sobic.005G073000 stress responsive protein, putative, expressed -
15 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
17 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
18 Sobic.004G349125 - -
19 Sobic.002G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
20 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase


Gene co-expression network
sample Sobic003G057600 Sobic003G057600 Sobic009G008300 Sobic009G008300 Sobic003G057600--Sobic009G008300 Sobic003G360600 Sobic003G360600 Sobic003G057600--Sobic003G360600 Sobic001G161601 Sobic001G161601 Sobic003G057600--Sobic001G161601 Sobic002G050400 Sobic002G050400 Sobic003G057600--Sobic002G050400 Sobic001G395800 Sobic001G395800 Sobic003G057600--Sobic001G395800 Sobic001G161500 Sobic001G161500 Sobic003G057600--Sobic001G161500 Sobic001G112100 Sobic001G112100 Sobic003G057600--Sobic001G112100 Sobic006G172550 Sobic006G172550 Sobic003G057600--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic003G057600--Sobic003G399600 Sobic002G245900 Sobic002G245900 Sobic009G008300--Sobic002G245900 Sobic007G133600 Sobic007G133600 Sobic009G008300--Sobic007G133600 Sobic009G008300--Sobic003G057600 Sobic004G249700 Sobic004G249700 Sobic009G008300--Sobic004G249700 Sobic001G239400 Sobic001G239400 Sobic009G008300--Sobic001G239400 Sobic001G076800 Sobic001G076800 Sobic009G008300--Sobic001G076800 Sobic004G042700 Sobic004G042700 Sobic009G008300--Sobic004G042700 Sobic002G032900 Sobic002G032900 Sobic009G008300--Sobic002G032900 Sobic009G008300--Sobic001G395800 Sobic010G106500 Sobic010G106500 Sobic003G360600--Sobic010G106500 Sobic009G106400 Sobic009G106400 Sobic003G360600--Sobic009G106400 Sobic001G238800 Sobic001G238800 Sobic003G360600--Sobic001G238800 Sobic004G349125 Sobic004G349125 Sobic003G360600--Sobic004G349125 Sobic003G311800 Sobic003G311800 Sobic003G360600--Sobic003G311800 Sobic003G269600 Sobic003G269600 Sobic003G360600--Sobic003G269600 Sobic003G360600--Sobic001G161500 Sobic001G416200 Sobic001G416200 Sobic003G360600--Sobic001G416200 Sobic004G318700 Sobic004G318700 Sobic003G360600--Sobic004G318700 Sobic003G043700 Sobic003G043700 Sobic001G161601--Sobic003G043700 Sobic001G161601--Sobic001G161500 Sobic002G350700 Sobic002G350700 Sobic001G161601--Sobic002G350700 Sobic001G059700 Sobic001G059700 Sobic001G161601--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic001G161601--Sobic010G085800 Sobic001G161601--Sobic004G318700 Sobic009G232100 Sobic009G232100 Sobic001G161601--Sobic009G232100 Sobic001G161601--Sobic001G112100 Sobic002G213600 Sobic002G213600 Sobic001G161601--Sobic002G213600 Sobic009G006200 Sobic009G006200 Sobic002G050400--Sobic009G006200 Sobic002G050400--Sobic003G057600 Sobic003G057366 Sobic003G057366 Sobic002G050400--Sobic003G057366 Sobic004G099500 Sobic004G099500 Sobic002G050400--Sobic004G099500 Sobic010G057100 Sobic010G057100 Sobic002G050400--Sobic010G057100 Sobic009G015000 Sobic009G015000 Sobic002G050400--Sobic009G015000 Sobic002G276000 Sobic002G276000 Sobic002G050400--Sobic002G276000 Sobic007G168400 Sobic007G168400 Sobic002G050400--Sobic007G168400 Sobic003G322532 Sobic003G322532 Sobic002G050400--Sobic003G322532 Sobic001G395800--Sobic003G311800 Sobic010G212500 Sobic010G212500 Sobic001G395800--Sobic010G212500 Sobic004G042000 Sobic004G042000 Sobic001G395800--Sobic004G042000 Sobic001G395800--Sobic003G399600 Sobic004G297900 Sobic004G297900 Sobic001G395800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic001G395800--Sobic002G003800 Sobic001G264000 Sobic001G264000 Sobic001G395800--Sobic001G264000 Sobic001G395800--Sobic003G269600 Sobic006G197100 Sobic006G197100 Sobic001G395800--Sobic006G197100 Sobic001G161500--Sobic001G416200 Sobic001G161500--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G161500--Sobic001G302600 Sobic001G161500--Sobic004G318700 Sobic001G304100 Sobic001G304100 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G161500--Sobic009G035300 Sobic001G161500--Sobic002G213600 Sobic001G161500--Sobic006G197100 Sobic009G188000 Sobic009G188000 Sobic001G112100--Sobic009G188000 Sobic004G295100 Sobic004G295100 Sobic001G112100--Sobic004G295100 Sobic001G112100--Sobic001G304100 Sobic008G009400 Sobic008G009400 Sobic001G112100--Sobic008G009400 Sobic001G112100--Sobic006G172550 Sobic001G112100--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic001G112100--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G112100--Sobic004G292900 Sobic006G235200 Sobic006G235200 Sobic001G112100--Sobic006G235200 Sobic006G172500 Sobic006G172500 Sobic006G172550--Sobic006G172500 Sobic006G172550--Sobic004G292900 Sobic006G172550--Sobic001G302600 Sobic006G172601 Sobic006G172601 Sobic006G172550--Sobic006G172601 Sobic006G172550--Sobic004G297900 Sobic001G300500 Sobic001G300500 Sobic006G172550--Sobic001G300500 Sobic005G073000 Sobic005G073000 Sobic006G172550--Sobic005G073000 Sobic006G172550--Sobic004G295100 Sobic006G172550--Sobic003G311800 Sobic006G225500 Sobic006G225500 Sobic003G399600--Sobic006G225500 Sobic003G399600--Sobic003G269600 Sobic002G326500 Sobic002G326500 Sobic003G399600--Sobic002G326500 Sobic003G140700 Sobic003G140700 Sobic003G399600--Sobic003G140700 Sobic003G399600--Sobic006G172500 Sobic001G304201 Sobic001G304201 Sobic003G399600--Sobic001G304201 Sobic004G110700 Sobic004G110700 Sobic003G399600--Sobic004G110700 Sobic009G186500 Sobic009G186500 Sobic003G399600--Sobic009G186500 Sobic006G150100 Sobic006G150100 Sobic003G399600--Sobic006G150100
Octagon: transcription factors


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