Gene annotation
Transcriptome id Sobic.002G005400.2
Synonym Sb02g000700
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
dirigent, putative, expressed
UniProt A0A1W0W1N0
Pfam PF03018
Panther DB PTHR21495 PTHR21495:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42510 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os07g01660.1 : dirigent, putative, expressed
MaizeGDB (Corn) Zm00025a016259 , Zm00025a006260
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G057600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G057366 - K11254: histone H4
3 Sobic.006G257100 dirigent-like protein pDIR17, putative, expressed -
4 Sobic.009G123000 expressed protein -
5 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
6 Sobic.003G395500 expressed protein -
7 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
10 Sobic.009G008300 expressed protein -
11 Sobic.002G390600 sec20 domain containing protein, expressed K08494: novel plant SNARE
12 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.007G005600 expressed protein -
14 Sobic.009G015000 expressed protein -
15 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
16 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
18 Sobic.006G003000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
20 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic002G005400 Sobic002G005400 Sobic003G057600 Sobic003G057600 Sobic002G005400--Sobic003G057600 Sobic003G057366 Sobic003G057366 Sobic002G005400--Sobic003G057366 Sobic006G257100 Sobic006G257100 Sobic002G005400--Sobic006G257100 Sobic009G123000 Sobic009G123000 Sobic002G005400--Sobic009G123000 Sobic007G172300 Sobic007G172300 Sobic002G005400--Sobic007G172300 Sobic003G395500 Sobic003G395500 Sobic002G005400--Sobic003G395500 Sobic002G050400 Sobic002G050400 Sobic002G005400--Sobic002G050400 Sobic006G166700 Sobic006G166700 Sobic002G005400--Sobic006G166700 Sobic004G099500 Sobic004G099500 Sobic002G005400--Sobic004G099500 Sobic009G008300 Sobic009G008300 Sobic003G057600--Sobic009G008300 Sobic003G360600 Sobic003G360600 Sobic003G057600--Sobic003G360600 Sobic001G161601 Sobic001G161601 Sobic003G057600--Sobic001G161601 Sobic003G057600--Sobic002G050400 Sobic001G395800 Sobic001G395800 Sobic003G057600--Sobic001G395800 Sobic001G161500 Sobic001G161500 Sobic003G057600--Sobic001G161500 Sobic001G112100 Sobic001G112100 Sobic003G057600--Sobic001G112100 Sobic006G172550 Sobic006G172550 Sobic003G057600--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic003G057600--Sobic003G399600 Sobic009G167500 Sobic009G167500 Sobic003G057366--Sobic009G167500 Sobic010G057100 Sobic010G057100 Sobic003G057366--Sobic010G057100 Sobic003G057366--Sobic004G099500 Sobic001G416900 Sobic001G416900 Sobic003G057366--Sobic001G416900 Sobic009G015000 Sobic009G015000 Sobic003G057366--Sobic009G015000 Sobic001G416800 Sobic001G416800 Sobic003G057366--Sobic001G416800 Sobic003G057366--Sobic007G172300 Sobic003G057366--Sobic002G050400 Sobic001G009700 Sobic001G009700 Sobic003G057366--Sobic001G009700 Sobic009G076800 Sobic009G076800 Sobic006G257100--Sobic009G076800 Sobic001G005000 Sobic001G005000 Sobic006G257100--Sobic001G005000 Sobic006G257100--Sobic006G166700 Sobic002G339400 Sobic002G339400 Sobic006G257100--Sobic002G339400 Sobic010G014300 Sobic010G014300 Sobic006G257100--Sobic010G014300 Sobic007G133600 Sobic007G133600 Sobic006G257100--Sobic007G133600 Sobic001G239400 Sobic001G239400 Sobic006G257100--Sobic001G239400 Sobic006G257100--Sobic002G005400 Sobic004G288400 Sobic004G288400 Sobic006G257100--Sobic004G288400 Sobic003G127600 Sobic003G127600 Sobic009G123000--Sobic003G127600 Sobic009G123000--Sobic001G416800 Sobic005G198300 Sobic005G198300 Sobic009G123000--Sobic005G198300 Sobic006G003000 Sobic006G003000 Sobic009G123000--Sobic006G003000 Sobic009G123000--Sobic001G416900 Sobic001G148600 Sobic001G148600 Sobic009G123000--Sobic001G148600 Sobic008G061000 Sobic008G061000 Sobic009G123000--Sobic008G061000 Sobic009G155500 Sobic009G155500 Sobic009G123000--Sobic009G155500 Sobic010G161300 Sobic010G161300 Sobic009G123000--Sobic010G161300 Sobic007G172300--Sobic003G395500 Sobic007G172300--Sobic009G015000 Sobic003G187100 Sobic003G187100 Sobic007G172300--Sobic003G187100 Sobic007G172300--Sobic003G057366 Sobic004G128000 Sobic004G128000 Sobic007G172300--Sobic004G128000 Sobic004G259700 Sobic004G259700 Sobic007G172300--Sobic004G259700 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic007G172300--Sobic001G416800 Sobic003G395500--Sobic007G172300 Sobic003G395500--Sobic009G015000 Sobic003G395500--Sobic004G099500 Sobic003G395500--Sobic004G259700 Sobic003G395500--Sobic003G187100 Sobic003G395500--Sobic001G239400 Sobic003G395500--Sobic002G005400 Sobic003G395500--Sobic005G198300 Sobic003G395500--Sobic006G003000 Sobic009G006200 Sobic009G006200 Sobic002G050400--Sobic009G006200 Sobic002G050400--Sobic003G057600 Sobic002G050400--Sobic003G057366 Sobic002G050400--Sobic004G099500 Sobic002G050400--Sobic010G057100 Sobic002G050400--Sobic009G015000 Sobic002G276000 Sobic002G276000 Sobic002G050400--Sobic002G276000 Sobic007G168400 Sobic007G168400 Sobic002G050400--Sobic007G168400 Sobic003G322532 Sobic003G322532 Sobic002G050400--Sobic003G322532 Sobic006G166700--Sobic010G014300 Sobic006G166700--Sobic001G005000 Sobic010G087200 Sobic010G087200 Sobic006G166700--Sobic010G087200 Sobic002G001300 Sobic002G001300 Sobic006G166700--Sobic002G001300 Sobic006G166700--Sobic004G288400 Sobic006G166700--Sobic001G239400 Sobic010G259200 Sobic010G259200 Sobic006G166700--Sobic010G259200 Sobic010G194500 Sobic010G194500 Sobic006G166700--Sobic010G194500 Sobic006G166700--Sobic009G076800 Sobic004G099500--Sobic010G057100 Sobic004G335600 Sobic004G335600 Sobic004G099500--Sobic004G335600 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G099500--Sobic007G045700 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic004G099500--Sobic003G322532
Octagon: transcription factors


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