Gene annotation
Transcriptome id Sobic.002G245900.1
Synonym Sb02g028250
Functional annotation AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5X3V0
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF107
NCBI CDD KOG0610; Putative serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G51170 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g31210.1 : AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a014200 , Zm00025a047437 , Zm00025a005069
Brachypodium KQJ98900 , PNT64827
Barley HORVU5Hr1G072930.2 , HORVU5Hr1G072930.3 , HORVU5Hr1G072930.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G008300 expressed protein -
2 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
3 Sobic.010G067300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
4 Sobic.001G076800 expressed protein -
5 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
6 Sobic.004G042700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
7 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
8 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
9 Sobic.009G032700 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.006G092500 expressed protein -
12 Sobic.001G169500 - -
13 Sobic.002G414700 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
14 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
15 Sobic.001G219200 myb-related protein Myb4, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.003G319500 receptor protein kinase, putative, expressed -
17 Sobic.009G015000 expressed protein -
18 Sobic.009G221600 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e


Gene co-expression network
sample Sobic002G245900 Sobic002G245900 Sobic009G008300 Sobic009G008300 Sobic002G245900--Sobic009G008300 Sobic007G133600 Sobic007G133600 Sobic002G245900--Sobic007G133600 Sobic010G067300 Sobic010G067300 Sobic002G245900--Sobic010G067300 Sobic001G076800 Sobic001G076800 Sobic002G245900--Sobic001G076800 Sobic004G335600 Sobic004G335600 Sobic002G245900--Sobic004G335600 Sobic004G042700 Sobic004G042700 Sobic002G245900--Sobic004G042700 Sobic004G099500 Sobic004G099500 Sobic002G245900--Sobic004G099500 Sobic001G239400 Sobic001G239400 Sobic002G245900--Sobic001G239400 Sobic009G032700 Sobic009G032700 Sobic002G245900--Sobic009G032700 Sobic009G008300--Sobic002G245900 Sobic009G008300--Sobic007G133600 Sobic003G057600 Sobic003G057600 Sobic009G008300--Sobic003G057600 Sobic004G249700 Sobic004G249700 Sobic009G008300--Sobic004G249700 Sobic009G008300--Sobic001G239400 Sobic009G008300--Sobic001G076800 Sobic009G008300--Sobic004G042700 Sobic002G032900 Sobic002G032900 Sobic009G008300--Sobic002G032900 Sobic001G395800 Sobic001G395800 Sobic009G008300--Sobic001G395800 Sobic007G133600--Sobic009G008300 Sobic007G133600--Sobic002G245900 Sobic007G133600--Sobic001G239400 Sobic001G005000 Sobic001G005000 Sobic007G133600--Sobic001G005000 Sobic007G133600--Sobic004G249700 Sobic006G166700 Sobic006G166700 Sobic007G133600--Sobic006G166700 Sobic004G288400 Sobic004G288400 Sobic007G133600--Sobic004G288400 Sobic007G133600--Sobic003G057600 Sobic010G087200 Sobic010G087200 Sobic007G133600--Sobic010G087200 Sobic010G067300--Sobic002G245900 Sobic010G067400 Sobic010G067400 Sobic010G067300--Sobic010G067400 Sobic006G277600 Sobic006G277600 Sobic010G067300--Sobic006G277600 Sobic010G184800 Sobic010G184800 Sobic010G067300--Sobic010G184800 Sobic006G092500 Sobic006G092500 Sobic010G067300--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic010G067300--Sobic009G111000 Sobic010G212800 Sobic010G212800 Sobic010G067300--Sobic010G212800 Sobic001G476500 Sobic001G476500 Sobic010G067300--Sobic001G476500 Sobic003G117600 Sobic003G117600 Sobic010G067300--Sobic003G117600 Sobic005G011300 Sobic005G011300 Sobic001G076800--Sobic005G011300 Sobic001G502400 Sobic001G502400 Sobic001G076800--Sobic001G502400 Sobic002G188900 Sobic002G188900 Sobic001G076800--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic001G076800--Sobic004G141200 Sobic005G107900 Sobic005G107900 Sobic001G076800--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic001G076800--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic001G076800--Sobic001G313600 Sobic003G432700 Sobic003G432700 Sobic001G076800--Sobic003G432700 Sobic003G382800 Sobic003G382800 Sobic001G076800--Sobic003G382800 Sobic004G271400 Sobic004G271400 Sobic004G335600--Sobic004G271400 Sobic002G414700 Sobic002G414700 Sobic004G335600--Sobic002G414700 Sobic009G177700 Sobic009G177700 Sobic004G335600--Sobic009G177700 Sobic003G152600 Sobic003G152600 Sobic004G335600--Sobic003G152600 Sobic004G335600--Sobic004G099500 Sobic009G105600 Sobic009G105600 Sobic004G335600--Sobic009G105600 Sobic010G057100 Sobic010G057100 Sobic004G335600--Sobic010G057100 Sobic008G172100 Sobic008G172100 Sobic004G335600--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G335600--Sobic007G045700 Sobic001G532200 Sobic001G532200 Sobic004G042700--Sobic001G532200 Sobic003G037800 Sobic003G037800 Sobic004G042700--Sobic003G037800 Sobic010G052200 Sobic010G052200 Sobic004G042700--Sobic010G052200 Sobic004G212300 Sobic004G212300 Sobic004G042700--Sobic004G212300 Sobic001G516600 Sobic001G516600 Sobic004G042700--Sobic001G516600 Sobic003G319500 Sobic003G319500 Sobic004G042700--Sobic003G319500 Sobic004G042700--Sobic002G245900 Sobic002G202600 Sobic002G202600 Sobic004G042700--Sobic002G202600 Sobic002G176100 Sobic002G176100 Sobic004G042700--Sobic002G176100 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic009G015000 Sobic009G015000 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic004G099500--Sobic008G172100 Sobic004G099500--Sobic007G045700 Sobic003G057366 Sobic003G057366 Sobic004G099500--Sobic003G057366 Sobic004G099500--Sobic004G271400 Sobic003G322532 Sobic003G322532 Sobic004G099500--Sobic003G322532 Sobic001G239400--Sobic001G005000 Sobic001G239400--Sobic007G133600 Sobic001G239400--Sobic004G249700 Sobic001G239400--Sobic006G166700 Sobic001G239400--Sobic004G288400 Sobic001G239400--Sobic009G008300 Sobic009G076800 Sobic009G076800 Sobic001G239400--Sobic009G076800 Sobic010G194500 Sobic010G194500 Sobic001G239400--Sobic010G194500 Sobic006G003000 Sobic006G003000 Sobic001G239400--Sobic006G003000 Sobic009G032700--Sobic003G432700 Sobic001G169500 Sobic001G169500 Sobic009G032700--Sobic001G169500 Sobic003G417200 Sobic003G417200 Sobic009G032700--Sobic003G417200 Sobic003G426400 Sobic003G426400 Sobic009G032700--Sobic003G426400 Sobic009G032700--Sobic005G107900 Sobic009G032700--Sobic003G319500 Sobic005G099000 Sobic005G099000 Sobic009G032700--Sobic005G099000 Sobic009G032700--Sobic005G011300 Sobic002G213600 Sobic002G213600 Sobic009G032700--Sobic002G213600
Octagon: transcription factors


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