Gene annotation
Transcriptome id Sobic.009G015000.1
Synonym Sb09g001440
Functional annotation expressed protein
UniProt -
Pfam -
Panther DB PTHR34565
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46430 : -
RAP-DB (Rice) LOC_Os03g40920.1 : expressed protein
MaizeGDB (Corn) Zm00025a038253
Brachypodium KQK11785 , KQK07705
Barley HORVU2Hr1G076650.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G015000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
2 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
3 Sobic.004G128000 expressed protein -
4 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
5 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
6 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
7 Sobic.002G253000 no apical meristem protein, putative, expressed -
8 Sobic.003G057366 - K11254: histone H4
9 Sobic.003G395500 expressed protein -
10 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
11 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
13 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
15 Sobic.009G177700 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
16 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
17 Sobic.003G338966 - -
18 Sobic.002G414700 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
19 Sobic.007G045700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
20 Sobic.002G318501 - -


Gene co-expression network
sample Sobic009G015000 Sobic009G015000 Sobic010G057100 Sobic010G057100 Sobic009G015000--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic009G015000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic009G015000--Sobic004G128000 Sobic007G172300 Sobic007G172300 Sobic009G015000--Sobic007G172300 Sobic004G335600 Sobic004G335600 Sobic009G015000--Sobic004G335600 Sobic003G322532 Sobic003G322532 Sobic009G015000--Sobic003G322532 Sobic002G253000 Sobic002G253000 Sobic009G015000--Sobic002G253000 Sobic003G057366 Sobic003G057366 Sobic009G015000--Sobic003G057366 Sobic003G395500 Sobic003G395500 Sobic009G015000--Sobic003G395500 Sobic010G057100--Sobic004G099500 Sobic010G057100--Sobic009G015000 Sobic010G057100--Sobic004G335600 Sobic010G057100--Sobic003G057366 Sobic010G057100--Sobic003G322532 Sobic010G057100--Sobic004G128000 Sobic009G177700 Sobic009G177700 Sobic010G057100--Sobic009G177700 Sobic007G045700 Sobic007G045700 Sobic010G057100--Sobic007G045700 Sobic001G313200 Sobic001G313200 Sobic010G057100--Sobic001G313200 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic004G099500--Sobic007G045700 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic004G099500--Sobic003G322532 Sobic004G128000--Sobic009G015000 Sobic004G128000--Sobic010G057100 Sobic004G128000--Sobic004G099500 Sobic004G128000--Sobic007G172300 Sobic009G206700 Sobic009G206700 Sobic004G128000--Sobic009G206700 Sobic004G128000--Sobic007G045700 Sobic004G128000--Sobic002G253000 Sobic004G128000--Sobic003G338966 Sobic004G128000--Sobic009G177700 Sobic007G172300--Sobic003G395500 Sobic007G172300--Sobic009G015000 Sobic003G187100 Sobic003G187100 Sobic007G172300--Sobic003G187100 Sobic007G172300--Sobic003G057366 Sobic007G172300--Sobic004G128000 Sobic004G259700 Sobic004G259700 Sobic007G172300--Sobic004G259700 Sobic001G416900 Sobic001G416900 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic001G416800 Sobic001G416800 Sobic007G172300--Sobic001G416800 Sobic004G335600--Sobic004G271400 Sobic002G414700 Sobic002G414700 Sobic004G335600--Sobic002G414700 Sobic004G335600--Sobic009G177700 Sobic003G152600 Sobic003G152600 Sobic004G335600--Sobic003G152600 Sobic004G335600--Sobic004G099500 Sobic009G105600 Sobic009G105600 Sobic004G335600--Sobic009G105600 Sobic004G335600--Sobic010G057100 Sobic004G335600--Sobic008G172100 Sobic004G335600--Sobic007G045700 Sobic003G322532--Sobic002G414700 Sobic001G295200 Sobic001G295200 Sobic003G322532--Sobic001G295200 Sobic007G211700 Sobic007G211700 Sobic003G322532--Sobic007G211700 Sobic005G107900 Sobic005G107900 Sobic003G322532--Sobic005G107900 Sobic001G367600 Sobic001G367600 Sobic003G322532--Sobic001G367600 Sobic003G322532--Sobic003G152600 Sobic003G043600 Sobic003G043600 Sobic003G322532--Sobic003G043600 Sobic009G111000 Sobic009G111000 Sobic003G322532--Sobic009G111000 Sobic001G493001 Sobic001G493001 Sobic003G322532--Sobic001G493001 Sobic002G318501 Sobic002G318501 Sobic002G253000--Sobic002G318501 Sobic002G253000--Sobic010G057100 Sobic002G253000--Sobic009G015000 Sobic005G016600 Sobic005G016600 Sobic002G253000--Sobic005G016600 Sobic002G314700 Sobic002G314700 Sobic002G253000--Sobic002G314700 Sobic004G342900 Sobic004G342900 Sobic002G253000--Sobic004G342900 Sobic002G253000--Sobic004G099500 Sobic002G253000--Sobic004G128000 Sobic001G062600 Sobic001G062600 Sobic002G253000--Sobic001G062600 Sobic009G167500 Sobic009G167500 Sobic003G057366--Sobic009G167500 Sobic003G057366--Sobic010G057100 Sobic003G057366--Sobic004G099500 Sobic003G057366--Sobic001G416900 Sobic003G057366--Sobic009G015000 Sobic003G057366--Sobic001G416800 Sobic003G057366--Sobic007G172300 Sobic002G050400 Sobic002G050400 Sobic003G057366--Sobic002G050400 Sobic001G009700 Sobic001G009700 Sobic003G057366--Sobic001G009700 Sobic003G395500--Sobic007G172300 Sobic003G395500--Sobic009G015000 Sobic003G395500--Sobic004G099500 Sobic003G395500--Sobic004G259700 Sobic003G395500--Sobic003G187100 Sobic001G239400 Sobic001G239400 Sobic003G395500--Sobic001G239400 Sobic002G005400 Sobic002G005400 Sobic003G395500--Sobic002G005400 Sobic005G198300 Sobic005G198300 Sobic003G395500--Sobic005G198300 Sobic006G003000 Sobic006G003000 Sobic003G395500--Sobic006G003000
Octagon: transcription factors


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