Gene annotation
Transcriptome id Sobic.006G244800.2
Synonym Sb06g031060, TIFY3B, JAZ, JAZ12
Functional annotation tran- scriptional repressor JASMONATE ZIM-DOMAIN (PubMedID : 25711704)
zinc-finger protein, putative, expressed
UniProt A0A1Z5RFF1
Pfam PF09425 PF06200
Panther DB PTHR33077 PTHR33077:SF5
NCBI CDD -
KEGG Orthology K13464; jasmonate ZIM domain-containing protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20900 : jasmonate-zim-domain protein 12
RAP-DB (Rice) LOC_Os04g55920.2 : zinc-finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a057236 , Zm00025a009572 , Zm00025a008096 , Zm00025a009495
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
2 Sobic.009G015000 expressed protein -
3 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
4 Sobic.003G338966 - -
5 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
6 Sobic.006G186700 histone H1-3(PubMedID : 26465154)@histone H1, putative, expressed K11275: histone H1/5
7 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
8 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
10 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G291066 - K11254: histone H4
12 Sobic.001G076800 expressed protein -
13 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.003G057366 - K11254: histone H4
15 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
16 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
17 Sobic.002G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
18 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
19 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
20 Sobic.003G395500 expressed protein -


Gene co-expression network
sample Sobic006G244800 Sobic006G244800 Sobic004G099500 Sobic004G099500 Sobic006G244800--Sobic004G099500 Sobic009G015000 Sobic009G015000 Sobic006G244800--Sobic009G015000 Sobic007G198000 Sobic007G198000 Sobic006G244800--Sobic007G198000 Sobic003G338966 Sobic003G338966 Sobic006G244800--Sobic003G338966 Sobic001G054800 Sobic001G054800 Sobic006G244800--Sobic001G054800 Sobic006G186700 Sobic006G186700 Sobic006G244800--Sobic006G186700 Sobic010G057100 Sobic010G057100 Sobic006G244800--Sobic010G057100 Sobic001G425300 Sobic001G425300 Sobic006G244800--Sobic001G425300 Sobic003G322532 Sobic003G322532 Sobic006G244800--Sobic003G322532 Sobic004G099500--Sobic010G057100 Sobic004G335600 Sobic004G335600 Sobic004G099500--Sobic004G335600 Sobic004G099500--Sobic009G015000 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G099500--Sobic007G045700 Sobic003G057366 Sobic003G057366 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic004G099500--Sobic003G322532 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic009G015000--Sobic004G128000 Sobic007G172300 Sobic007G172300 Sobic009G015000--Sobic007G172300 Sobic009G015000--Sobic004G335600 Sobic009G015000--Sobic003G322532 Sobic002G253000 Sobic002G253000 Sobic009G015000--Sobic002G253000 Sobic009G015000--Sobic003G057366 Sobic003G395500 Sobic003G395500 Sobic009G015000--Sobic003G395500 Sobic003G347900 Sobic003G347900 Sobic007G198000--Sobic003G347900 Sobic006G057200 Sobic006G057200 Sobic007G198000--Sobic006G057200 Sobic001G529400 Sobic001G529400 Sobic007G198000--Sobic001G529400 Sobic010G070500 Sobic010G070500 Sobic007G198000--Sobic010G070500 Sobic003G160700 Sobic003G160700 Sobic007G198000--Sobic003G160700 Sobic010G047100 Sobic010G047100 Sobic007G198000--Sobic010G047100 Sobic001G475500 Sobic001G475500 Sobic007G198000--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic007G198000--Sobic003G027400 Sobic003G379600 Sobic003G379600 Sobic007G198000--Sobic003G379600 Sobic003G338966--Sobic004G099500 Sobic003G338966--Sobic008G172100 Sobic004G244800 Sobic004G244800 Sobic003G338966--Sobic004G244800 Sobic003G338966--Sobic006G057200 Sobic009G242300 Sobic009G242300 Sobic003G338966--Sobic009G242300 Sobic001G175300 Sobic001G175300 Sobic003G338966--Sobic001G175300 Sobic003G338966--Sobic010G057100 Sobic003G338966--Sobic007G198000 Sobic002G291066 Sobic002G291066 Sobic003G338966--Sobic002G291066 Sobic002G276000 Sobic002G276000 Sobic001G054800--Sobic002G276000 Sobic003G057100 Sobic003G057100 Sobic001G054800--Sobic003G057100 Sobic001G054800--Sobic002G291066 Sobic001G054800--Sobic007G198000 Sobic001G009700 Sobic001G009700 Sobic001G054800--Sobic001G009700 Sobic001G054800--Sobic001G529400 Sobic001G054800--Sobic003G347900 Sobic009G167500 Sobic009G167500 Sobic001G054800--Sobic009G167500 Sobic001G054800--Sobic010G047100 Sobic001G313200 Sobic001G313200 Sobic006G186700--Sobic001G313200 Sobic001G372100 Sobic001G372100 Sobic006G186700--Sobic001G372100 Sobic006G274700 Sobic006G274700 Sobic006G186700--Sobic006G274700 Sobic006G186700--Sobic002G291066 Sobic006G186700--Sobic001G529400 Sobic006G186700--Sobic010G047100 Sobic006G186700--Sobic004G335600 Sobic001G247300 Sobic001G247300 Sobic006G186700--Sobic001G247300 Sobic005G186100 Sobic005G186100 Sobic006G186700--Sobic005G186100 Sobic010G057100--Sobic004G099500 Sobic010G057100--Sobic009G015000 Sobic010G057100--Sobic004G335600 Sobic010G057100--Sobic003G057366 Sobic010G057100--Sobic003G322532 Sobic010G057100--Sobic004G128000 Sobic009G177700 Sobic009G177700 Sobic010G057100--Sobic009G177700 Sobic010G057100--Sobic007G045700 Sobic010G057100--Sobic001G313200 Sobic002G318501 Sobic002G318501 Sobic001G425300--Sobic002G318501 Sobic005G139075 Sobic005G139075 Sobic001G425300--Sobic005G139075 Sobic001G425300--Sobic003G322532 Sobic001G112100 Sobic001G112100 Sobic001G425300--Sobic001G112100 Sobic001G351000 Sobic001G351000 Sobic001G425300--Sobic001G351000 Sobic001G459800 Sobic001G459800 Sobic001G425300--Sobic001G459800 Sobic005G011300 Sobic005G011300 Sobic001G425300--Sobic005G011300 Sobic002G314700 Sobic002G314700 Sobic001G425300--Sobic002G314700 Sobic003G432700 Sobic003G432700 Sobic001G425300--Sobic003G432700 Sobic002G414700 Sobic002G414700 Sobic003G322532--Sobic002G414700 Sobic001G295200 Sobic001G295200 Sobic003G322532--Sobic001G295200 Sobic007G211700 Sobic007G211700 Sobic003G322532--Sobic007G211700 Sobic005G107900 Sobic005G107900 Sobic003G322532--Sobic005G107900 Sobic001G367600 Sobic001G367600 Sobic003G322532--Sobic001G367600 Sobic003G152600 Sobic003G152600 Sobic003G322532--Sobic003G152600 Sobic003G043600 Sobic003G043600 Sobic003G322532--Sobic003G043600 Sobic009G111000 Sobic009G111000 Sobic003G322532--Sobic009G111000 Sobic001G493001 Sobic001G493001 Sobic003G322532--Sobic001G493001
Octagon: transcription factors


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