Gene annotation
Transcriptome id Sobic.007G168400.1
Synonym Sb07g024120
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YN69
Pfam PF04568
Panther DB PTHR33878 PTHR33878:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005739; mitochondrion GO:0004857enzyme inhibitor activity


Orthologs (automatic annotation)
TAIR AT5G04750 : F1F0-ATPase inhibitor protein, putative
RAP-DB (Rice) LOC_Os08g44460.3 : expressed protein
MaizeGDB (Corn) Zm00025a005601
Brachypodium PNT68573
Barley -
Wheat TraesCS7A02G279400 , TraesCS7B02G180800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G168400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
2 Sobic.010G013100 expressed protein -
3 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
4 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
5 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
6 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.003G057600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
9 Sobic.001G009700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
10 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
12 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
13 Sobic.003G338966 - -
14 Sobic.003G395500 expressed protein -
15 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
16 Sobic.001G216800 expressed protein -
17 Sobic.003G057366 - K11254: histone H4
18 Sobic.003G187100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.009G015000 expressed protein -
20 Sobic.001G161601 - K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic007G168400 Sobic007G168400 Sobic004G259700 Sobic004G259700 Sobic007G168400--Sobic004G259700 Sobic010G013100 Sobic010G013100 Sobic007G168400--Sobic010G013100 Sobic001G416900 Sobic001G416900 Sobic007G168400--Sobic001G416900 Sobic004G099500 Sobic004G099500 Sobic007G168400--Sobic004G099500 Sobic009G167500 Sobic009G167500 Sobic007G168400--Sobic009G167500 Sobic002G276000 Sobic002G276000 Sobic007G168400--Sobic002G276000 Sobic003G057600 Sobic003G057600 Sobic007G168400--Sobic003G057600 Sobic001G054800 Sobic001G054800 Sobic007G168400--Sobic001G054800 Sobic001G009700 Sobic001G009700 Sobic007G168400--Sobic001G009700 Sobic004G259700--Sobic001G416900 Sobic004G259700--Sobic009G167500 Sobic009G123000 Sobic009G123000 Sobic004G259700--Sobic009G123000 Sobic004G259700--Sobic004G099500 Sobic001G416800 Sobic001G416800 Sobic004G259700--Sobic001G416800 Sobic003G127600 Sobic003G127600 Sobic004G259700--Sobic003G127600 Sobic007G172300 Sobic007G172300 Sobic004G259700--Sobic007G172300 Sobic003G057366 Sobic003G057366 Sobic004G259700--Sobic003G057366 Sobic004G259700--Sobic007G168400 Sobic003G300701 Sobic003G300701 Sobic010G013100--Sobic003G300701 Sobic010G013100--Sobic001G416900 Sobic001G417000 Sobic001G417000 Sobic010G013100--Sobic001G417000 Sobic010G013100--Sobic009G167500 Sobic010G013100--Sobic007G168400 Sobic010G013100--Sobic001G009700 Sobic001G216800 Sobic001G216800 Sobic010G013100--Sobic001G216800 Sobic004G300701 Sobic004G300701 Sobic010G013100--Sobic004G300701 Sobic010G013100--Sobic004G259700 Sobic001G416900--Sobic001G416800 Sobic001G416900--Sobic003G127600 Sobic001G416900--Sobic001G417000 Sobic002G059200 Sobic002G059200 Sobic001G416900--Sobic002G059200 Sobic001G416900--Sobic009G123000 Sobic002G209300 Sobic002G209300 Sobic001G416900--Sobic002G209300 Sobic002G403400 Sobic002G403400 Sobic001G416900--Sobic002G403400 Sobic002G056300 Sobic002G056300 Sobic001G416900--Sobic002G056300 Sobic001G416900--Sobic003G300701 Sobic010G057100 Sobic010G057100 Sobic004G099500--Sobic010G057100 Sobic004G335600 Sobic004G335600 Sobic004G099500--Sobic004G335600 Sobic009G015000 Sobic009G015000 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G099500--Sobic007G045700 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic003G322532 Sobic003G322532 Sobic004G099500--Sobic003G322532 Sobic009G167500--Sobic001G009700 Sobic009G167500--Sobic003G057366 Sobic009G167500--Sobic001G416900 Sobic009G167500--Sobic004G259700 Sobic009G167500--Sobic002G276000 Sobic009G167500--Sobic010G013100 Sobic003G057100 Sobic003G057100 Sobic009G167500--Sobic003G057100 Sobic009G167500--Sobic001G054800 Sobic009G167500--Sobic003G127600 Sobic002G276000--Sobic003G057100 Sobic002G276000--Sobic001G054800 Sobic003G347900 Sobic003G347900 Sobic002G276000--Sobic003G347900 Sobic001G529400 Sobic001G529400 Sobic002G276000--Sobic001G529400 Sobic002G276000--Sobic001G009700 Sobic002G291066 Sobic002G291066 Sobic002G276000--Sobic002G291066 Sobic007G198000 Sobic007G198000 Sobic002G276000--Sobic007G198000 Sobic010G047200 Sobic010G047200 Sobic002G276000--Sobic010G047200 Sobic009G015900 Sobic009G015900 Sobic002G276000--Sobic009G015900 Sobic009G008300 Sobic009G008300 Sobic003G057600--Sobic009G008300 Sobic003G360600 Sobic003G360600 Sobic003G057600--Sobic003G360600 Sobic001G161601 Sobic001G161601 Sobic003G057600--Sobic001G161601 Sobic002G050400 Sobic002G050400 Sobic003G057600--Sobic002G050400 Sobic001G395800 Sobic001G395800 Sobic003G057600--Sobic001G395800 Sobic001G161500 Sobic001G161500 Sobic003G057600--Sobic001G161500 Sobic001G112100 Sobic001G112100 Sobic003G057600--Sobic001G112100 Sobic006G172550 Sobic006G172550 Sobic003G057600--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic003G057600--Sobic003G399600 Sobic001G054800--Sobic002G276000 Sobic001G054800--Sobic003G057100 Sobic001G054800--Sobic002G291066 Sobic001G054800--Sobic007G198000 Sobic001G054800--Sobic001G009700 Sobic001G054800--Sobic001G529400 Sobic001G054800--Sobic003G347900 Sobic001G054800--Sobic009G167500 Sobic010G047100 Sobic010G047100 Sobic001G054800--Sobic010G047100 Sobic001G009700--Sobic009G167500 Sobic001G009700--Sobic002G276000 Sobic001G009700--Sobic001G054800 Sobic001G009700--Sobic003G057100 Sobic002G210500 Sobic002G210500 Sobic001G009700--Sobic002G210500 Sobic001G009700--Sobic003G057366 Sobic001G009700--Sobic010G013100 Sobic001G009700--Sobic004G099500 Sobic001G009700--Sobic003G338966
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.