Gene annotation
Transcriptome id Sobic.003G395500.1
Synonym Sb03g043260
Functional annotation expressed protein
UniProt C5XFJ0
Pfam -
Panther DB PTHR37711
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67785 : -
RAP-DB (Rice) LOC_Os01g68030.1 : expressed protein
MaizeGDB (Corn) Zm00025a039423
Brachypodium KQK11110
Barley HORVU3Hr1G092170.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
2 Sobic.009G015000 expressed protein -
3 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
4 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
5 Sobic.003G187100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
7 Sobic.002G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
8 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G003000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
11 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
12 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G123000 expressed protein -
14 Sobic.001G005000 receptor protein kinase, putative, expressed -
15 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
16 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
17 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.003G338966 - -
20 Sobic.004G128000 expressed protein -


Gene co-expression network
sample Sobic003G395500 Sobic003G395500 Sobic007G172300 Sobic007G172300 Sobic003G395500--Sobic007G172300 Sobic009G015000 Sobic009G015000 Sobic003G395500--Sobic009G015000 Sobic004G099500 Sobic004G099500 Sobic003G395500--Sobic004G099500 Sobic004G259700 Sobic004G259700 Sobic003G395500--Sobic004G259700 Sobic003G187100 Sobic003G187100 Sobic003G395500--Sobic003G187100 Sobic001G239400 Sobic001G239400 Sobic003G395500--Sobic001G239400 Sobic002G005400 Sobic002G005400 Sobic003G395500--Sobic002G005400 Sobic005G198300 Sobic005G198300 Sobic003G395500--Sobic005G198300 Sobic006G003000 Sobic006G003000 Sobic003G395500--Sobic006G003000 Sobic007G172300--Sobic003G395500 Sobic007G172300--Sobic009G015000 Sobic007G172300--Sobic003G187100 Sobic003G057366 Sobic003G057366 Sobic007G172300--Sobic003G057366 Sobic004G128000 Sobic004G128000 Sobic007G172300--Sobic004G128000 Sobic007G172300--Sobic004G259700 Sobic001G416900 Sobic001G416900 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic001G416800 Sobic001G416800 Sobic007G172300--Sobic001G416800 Sobic010G057100 Sobic010G057100 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic009G015000--Sobic004G128000 Sobic009G015000--Sobic007G172300 Sobic004G335600 Sobic004G335600 Sobic009G015000--Sobic004G335600 Sobic003G322532 Sobic003G322532 Sobic009G015000--Sobic003G322532 Sobic002G253000 Sobic002G253000 Sobic009G015000--Sobic002G253000 Sobic009G015000--Sobic003G057366 Sobic009G015000--Sobic003G395500 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G099500--Sobic007G045700 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic004G099500--Sobic003G322532 Sobic004G259700--Sobic001G416900 Sobic009G167500 Sobic009G167500 Sobic004G259700--Sobic009G167500 Sobic009G123000 Sobic009G123000 Sobic004G259700--Sobic009G123000 Sobic004G259700--Sobic004G099500 Sobic004G259700--Sobic001G416800 Sobic003G127600 Sobic003G127600 Sobic004G259700--Sobic003G127600 Sobic004G259700--Sobic007G172300 Sobic004G259700--Sobic003G057366 Sobic007G168400 Sobic007G168400 Sobic004G259700--Sobic007G168400 Sobic003G187100--Sobic007G172300 Sobic003G187100--Sobic003G395500 Sobic003G187100--Sobic004G259700 Sobic003G187100--Sobic009G167500 Sobic003G187100--Sobic009G015000 Sobic003G187100--Sobic003G057366 Sobic001G041000 Sobic001G041000 Sobic003G187100--Sobic001G041000 Sobic003G187100--Sobic004G128000 Sobic003G187100--Sobic004G099500 Sobic001G005000 Sobic001G005000 Sobic001G239400--Sobic001G005000 Sobic007G133600 Sobic007G133600 Sobic001G239400--Sobic007G133600 Sobic004G249700 Sobic004G249700 Sobic001G239400--Sobic004G249700 Sobic006G166700 Sobic006G166700 Sobic001G239400--Sobic006G166700 Sobic004G288400 Sobic004G288400 Sobic001G239400--Sobic004G288400 Sobic009G008300 Sobic009G008300 Sobic001G239400--Sobic009G008300 Sobic009G076800 Sobic009G076800 Sobic001G239400--Sobic009G076800 Sobic010G194500 Sobic010G194500 Sobic001G239400--Sobic010G194500 Sobic001G239400--Sobic006G003000 Sobic003G057600 Sobic003G057600 Sobic002G005400--Sobic003G057600 Sobic002G005400--Sobic003G057366 Sobic006G257100 Sobic006G257100 Sobic002G005400--Sobic006G257100 Sobic002G005400--Sobic009G123000 Sobic002G005400--Sobic007G172300 Sobic002G005400--Sobic003G395500 Sobic002G050400 Sobic002G050400 Sobic002G005400--Sobic002G050400 Sobic002G005400--Sobic006G166700 Sobic002G005400--Sobic004G099500 Sobic005G198300--Sobic009G123000 Sobic005G198300--Sobic006G003000 Sobic005G198300--Sobic004G288400 Sobic005G198300--Sobic003G127600 Sobic005G198300--Sobic006G166700 Sobic001G148600 Sobic001G148600 Sobic005G198300--Sobic001G148600 Sobic010G014300 Sobic010G014300 Sobic005G198300--Sobic010G014300 Sobic005G198300--Sobic001G416800 Sobic010G087200 Sobic010G087200 Sobic005G198300--Sobic010G087200 Sobic006G003000--Sobic009G123000 Sobic006G003000--Sobic005G198300 Sobic006G003000--Sobic010G194500 Sobic006G003000--Sobic001G005000 Sobic006G018900 Sobic006G018900 Sobic006G003000--Sobic006G018900 Sobic006G003000--Sobic001G148600 Sobic006G003000--Sobic001G239400 Sobic006G003000--Sobic010G014300 Sobic010G161300 Sobic010G161300 Sobic006G003000--Sobic010G161300
Octagon: transcription factors


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