Gene annotation
Transcriptome id Sobic.004G128000.1
Synonym Sb04g011040
Functional annotation expressed protein
UniProt C5Y045
Pfam -
Panther DB PTHR33618 PTHR33618:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39600 : -
RAP-DB (Rice) LOC_Os02g18090.1 : expressed protein
MaizeGDB (Corn) Zm00025a019777
Brachypodium KQJ94414
Barley HORVU7Hr1G093490.2 , HORVU7Hr1G093490.3 , HORVU7Hr1G093490.4 , HORVU0Hr1G019770.2 , HORVU0Hr1G019770.3 , HORVU0Hr1G019770.1 , HORVU0Hr1G019770.4
Wheat TraesCS7A02G181000 , TraesCS7B02G178100 , TraesCS7A02G397900 , TraesCS7B02G086000 , TraesCS7D02G182800 , TraesCS7D02G392300 , TraesCS7B02G298800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G015000 expressed protein -
2 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
3 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
4 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
5 Sobic.009G206700 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
6 Sobic.007G045700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
7 Sobic.002G253000 no apical meristem protein, putative, expressed -
8 Sobic.003G338966 - -
9 Sobic.009G177700 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
10 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
11 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
12 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
13 Sobic.002G246200 expressed protein -
14 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
15 Sobic.003G057366 - K11254: histone H4
16 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G318501 - -
18 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
19 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.003G187100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic004G128000 Sobic004G128000 Sobic009G015000 Sobic009G015000 Sobic004G128000--Sobic009G015000 Sobic010G057100 Sobic010G057100 Sobic004G128000--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic004G128000--Sobic004G099500 Sobic007G172300 Sobic007G172300 Sobic004G128000--Sobic007G172300 Sobic009G206700 Sobic009G206700 Sobic004G128000--Sobic009G206700 Sobic007G045700 Sobic007G045700 Sobic004G128000--Sobic007G045700 Sobic002G253000 Sobic002G253000 Sobic004G128000--Sobic002G253000 Sobic003G338966 Sobic003G338966 Sobic004G128000--Sobic003G338966 Sobic009G177700 Sobic009G177700 Sobic004G128000--Sobic009G177700 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic009G015000--Sobic004G128000 Sobic009G015000--Sobic007G172300 Sobic004G335600 Sobic004G335600 Sobic009G015000--Sobic004G335600 Sobic003G322532 Sobic003G322532 Sobic009G015000--Sobic003G322532 Sobic009G015000--Sobic002G253000 Sobic003G057366 Sobic003G057366 Sobic009G015000--Sobic003G057366 Sobic003G395500 Sobic003G395500 Sobic009G015000--Sobic003G395500 Sobic010G057100--Sobic004G099500 Sobic010G057100--Sobic009G015000 Sobic010G057100--Sobic004G335600 Sobic010G057100--Sobic003G057366 Sobic010G057100--Sobic003G322532 Sobic010G057100--Sobic004G128000 Sobic010G057100--Sobic009G177700 Sobic010G057100--Sobic007G045700 Sobic001G313200 Sobic001G313200 Sobic010G057100--Sobic001G313200 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic004G099500--Sobic009G015000 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic004G099500--Sobic007G045700 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic004G099500--Sobic003G322532 Sobic007G172300--Sobic003G395500 Sobic007G172300--Sobic009G015000 Sobic003G187100 Sobic003G187100 Sobic007G172300--Sobic003G187100 Sobic007G172300--Sobic003G057366 Sobic007G172300--Sobic004G128000 Sobic004G259700 Sobic004G259700 Sobic007G172300--Sobic004G259700 Sobic001G416900 Sobic001G416900 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic001G416800 Sobic001G416800 Sobic007G172300--Sobic001G416800 Sobic006G057200 Sobic006G057200 Sobic009G206700--Sobic006G057200 Sobic010G264300 Sobic010G264300 Sobic009G206700--Sobic010G264300 Sobic001G286200 Sobic001G286200 Sobic009G206700--Sobic001G286200 Sobic002G246200 Sobic002G246200 Sobic009G206700--Sobic002G246200 Sobic004G244800 Sobic004G244800 Sobic009G206700--Sobic004G244800 Sobic009G212200 Sobic009G212200 Sobic009G206700--Sobic009G212200 Sobic001G519000 Sobic001G519000 Sobic009G206700--Sobic001G519000 Sobic001G175300 Sobic001G175300 Sobic009G206700--Sobic001G175300 Sobic002G356400 Sobic002G356400 Sobic009G206700--Sobic002G356400 Sobic007G045700--Sobic009G177700 Sobic007G045700--Sobic004G271400 Sobic003G322400 Sobic003G322400 Sobic007G045700--Sobic003G322400 Sobic005G195301 Sobic005G195301 Sobic007G045700--Sobic005G195301 Sobic003G152600 Sobic003G152600 Sobic007G045700--Sobic003G152600 Sobic009G163800 Sobic009G163800 Sobic007G045700--Sobic009G163800 Sobic006G260400 Sobic006G260400 Sobic007G045700--Sobic006G260400 Sobic004G331400 Sobic004G331400 Sobic007G045700--Sobic004G331400 Sobic009G050300 Sobic009G050300 Sobic007G045700--Sobic009G050300 Sobic002G318501 Sobic002G318501 Sobic002G253000--Sobic002G318501 Sobic002G253000--Sobic010G057100 Sobic002G253000--Sobic009G015000 Sobic005G016600 Sobic005G016600 Sobic002G253000--Sobic005G016600 Sobic002G314700 Sobic002G314700 Sobic002G253000--Sobic002G314700 Sobic004G342900 Sobic004G342900 Sobic002G253000--Sobic004G342900 Sobic002G253000--Sobic004G099500 Sobic002G253000--Sobic004G128000 Sobic001G062600 Sobic001G062600 Sobic002G253000--Sobic001G062600 Sobic003G338966--Sobic004G099500 Sobic003G338966--Sobic008G172100 Sobic003G338966--Sobic004G244800 Sobic003G338966--Sobic006G057200 Sobic009G242300 Sobic009G242300 Sobic003G338966--Sobic009G242300 Sobic003G338966--Sobic001G175300 Sobic003G338966--Sobic010G057100 Sobic007G198000 Sobic007G198000 Sobic003G338966--Sobic007G198000 Sobic002G291066 Sobic002G291066 Sobic003G338966--Sobic002G291066 Sobic009G177700--Sobic007G045700 Sobic009G177700--Sobic004G335600 Sobic009G177700--Sobic004G271400 Sobic009G177700--Sobic005G195301 Sobic009G177700--Sobic003G152600 Sobic009G177700--Sobic003G322400 Sobic009G105600 Sobic009G105600 Sobic009G177700--Sobic009G105600 Sobic006G147000 Sobic006G147000 Sobic009G177700--Sobic006G147000 Sobic003G408100 Sobic003G408100 Sobic009G177700--Sobic003G408100
Octagon: transcription factors


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