Gene annotation
Transcriptome id Sobic.009G177700.1
Synonym RPL24A, Sb09g023800
Functional annotation ribosomal protein L24, putative, expressed
UniProt C5YZW6
Pfam PF01246
Panther DB PTHR10792 PTHR10792:SF11
NCBI CDD KOG1722; 60s ribosomal protein L24
KEGG Orthology K02896; RP-L24e, large subunit ribosomal protein L24e
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36620 : ribosomal protein L24
RAP-DB (Rice) LOC_Os05g40820.2 : ribosomal protein L24, putative, expressed
MaizeGDB (Corn) Zm00025a017338 , Zm00025a007171 , Zm00025a037804
Brachypodium KQK10303 , KQJ98758 , KQK12510 , KQK10304
Barley HORVU5Hr1G111510.4 , HORVU5Hr1G111510.5 , HORVU5Hr1G111510.1 , HORVU5Hr1G111510.2 , HORVU5Hr1G111510.3 , HORVU3Hr1G080130.1 , HORVU3Hr1G080130.3 , HORVU3Hr1G080130.2 , HORVU5Hr1G111570.2 , HORVU3Hr1G080130.4
Wheat TraesCS3D02G332800 , TraesCS3A02G339200 , TraesCS3B02G370900 , TraesCS5B02G480800
Populus -


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cDNA sequences
Sobic.009G177700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G045700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
2 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
3 Sobic.004G271400 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
4 Sobic.005G195301 - K02980: RP-S29e, small subunit ribosomal protein S29e
5 Sobic.003G152600 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
6 Sobic.003G322400 40S ribosomal protein S25, putative, expressed K02975: RP-S25e, small subunit ribosomal protein S25e
7 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
8 Sobic.006G147000 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
9 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
10 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e
11 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
12 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
13 Sobic.003G113700 expressed protein -
14 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
15 Sobic.006G260400 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
16 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
17 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
18 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
19 Sobic.001G036900 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
20 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e


Gene co-expression network
sample Sobic009G177700 Sobic009G177700 Sobic007G045700 Sobic007G045700 Sobic009G177700--Sobic007G045700 Sobic004G335600 Sobic004G335600 Sobic009G177700--Sobic004G335600 Sobic004G271400 Sobic004G271400 Sobic009G177700--Sobic004G271400 Sobic005G195301 Sobic005G195301 Sobic009G177700--Sobic005G195301 Sobic003G152600 Sobic003G152600 Sobic009G177700--Sobic003G152600 Sobic003G322400 Sobic003G322400 Sobic009G177700--Sobic003G322400 Sobic009G105600 Sobic009G105600 Sobic009G177700--Sobic009G105600 Sobic006G147000 Sobic006G147000 Sobic009G177700--Sobic006G147000 Sobic003G408100 Sobic003G408100 Sobic009G177700--Sobic003G408100 Sobic007G045700--Sobic009G177700 Sobic007G045700--Sobic004G271400 Sobic007G045700--Sobic003G322400 Sobic007G045700--Sobic005G195301 Sobic007G045700--Sobic003G152600 Sobic009G163800 Sobic009G163800 Sobic007G045700--Sobic009G163800 Sobic006G260400 Sobic006G260400 Sobic007G045700--Sobic006G260400 Sobic004G331400 Sobic004G331400 Sobic007G045700--Sobic004G331400 Sobic009G050300 Sobic009G050300 Sobic007G045700--Sobic009G050300 Sobic004G335600--Sobic004G271400 Sobic002G414700 Sobic002G414700 Sobic004G335600--Sobic002G414700 Sobic004G335600--Sobic009G177700 Sobic004G335600--Sobic003G152600 Sobic004G099500 Sobic004G099500 Sobic004G335600--Sobic004G099500 Sobic004G335600--Sobic009G105600 Sobic010G057100 Sobic010G057100 Sobic004G335600--Sobic010G057100 Sobic008G172100 Sobic008G172100 Sobic004G335600--Sobic008G172100 Sobic004G335600--Sobic007G045700 Sobic004G271400--Sobic003G152600 Sobic004G271400--Sobic002G414700 Sobic004G271400--Sobic003G322400 Sobic001G054900 Sobic001G054900 Sobic004G271400--Sobic001G054900 Sobic005G019700 Sobic005G019700 Sobic004G271400--Sobic005G019700 Sobic004G271400--Sobic009G050300 Sobic004G271400--Sobic004G331400 Sobic004G008400 Sobic004G008400 Sobic004G271400--Sobic004G008400 Sobic007G178600 Sobic007G178600 Sobic004G271400--Sobic007G178600 Sobic007G212600 Sobic007G212600 Sobic005G195301--Sobic007G212600 Sobic009G166500 Sobic009G166500 Sobic005G195301--Sobic009G166500 Sobic006G047400 Sobic006G047400 Sobic005G195301--Sobic006G047400 Sobic001G091801 Sobic001G091801 Sobic005G195301--Sobic001G091801 Sobic003G321700 Sobic003G321700 Sobic005G195301--Sobic003G321700 Sobic005G195301--Sobic003G322400 Sobic005G195301--Sobic009G163800 Sobic004G145801 Sobic004G145801 Sobic005G195301--Sobic004G145801 Sobic001G374700 Sobic001G374700 Sobic005G195301--Sobic001G374700 Sobic003G152600--Sobic003G408100 Sobic003G152600--Sobic001G054900 Sobic003G152600--Sobic004G271400 Sobic003G152600--Sobic004G331400 Sobic003G152600--Sobic003G322400 Sobic001G376600 Sobic001G376600 Sobic003G152600--Sobic001G376600 Sobic004G103800 Sobic004G103800 Sobic003G152600--Sobic004G103800 Sobic010G206200 Sobic010G206200 Sobic003G152600--Sobic010G206200 Sobic003G152600--Sobic001G374700 Sobic003G322400--Sobic009G050300 Sobic003G322400--Sobic001G091801 Sobic003G322400--Sobic007G212600 Sobic006G116700 Sobic006G116700 Sobic003G322400--Sobic006G116700 Sobic003G322400--Sobic001G054900 Sobic003G322400--Sobic003G408100 Sobic003G322400--Sobic001G374700 Sobic002G200600 Sobic002G200600 Sobic003G322400--Sobic002G200600 Sobic007G184600 Sobic007G184600 Sobic003G322400--Sobic007G184600 Sobic009G105700 Sobic009G105700 Sobic009G105600--Sobic009G105700 Sobic009G105600--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic009G105600--Sobic002G175100 Sobic009G105600--Sobic004G271400 Sobic009G105600--Sobic002G414700 Sobic009G105600--Sobic007G184600 Sobic009G105600--Sobic003G322400 Sobic009G105600--Sobic006G047400 Sobic009G105600--Sobic001G374700 Sobic003G346600 Sobic003G346600 Sobic006G147000--Sobic003G346600 Sobic006G147000--Sobic009G163800 Sobic010G060500 Sobic010G060500 Sobic006G147000--Sobic010G060500 Sobic006G147000--Sobic009G166500 Sobic002G081600 Sobic002G081600 Sobic006G147000--Sobic002G081600 Sobic006G147000--Sobic007G178600 Sobic006G147000--Sobic003G322400 Sobic006G147000--Sobic009G050300 Sobic006G147000--Sobic007G212600 Sobic003G408100--Sobic001G054900 Sobic003G408100--Sobic003G152600 Sobic001G018900 Sobic001G018900 Sobic003G408100--Sobic001G018900 Sobic003G408100--Sobic009G163800 Sobic003G408100--Sobic006G116700 Sobic003G408100--Sobic010G206200 Sobic003G408100--Sobic009G050300 Sobic001G036900 Sobic001G036900 Sobic003G408100--Sobic001G036900 Sobic009G215200 Sobic009G215200 Sobic003G408100--Sobic009G215200
Octagon: transcription factors


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