Gene annotation
Transcriptome id Sobic.003G187100.1
Synonym ATGSTU17, Sb03g025220, GST30B, GST30, ERD9
Functional annotation glutathione S-transferase, putative, expressed
UniProt C5XN17
Pfam PF13410 PF13417
Panther DB PTHR11260 PTHR11260:SF226
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10370 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os10g38140.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a028793
Brachypodium -
Barley HORVU3Hr1G064320.2 , HORVU3Hr1G064320.3 , HORVU3Hr1G064320.1 , HORVU3Hr1G064320.4 , HORVU1Hr1G049260.4 , HORVU1Hr1G049260.5 , HORVU1Hr1G049260.1 , HORVU1Hr1G049260.3 , HORVU1Hr1G049260.2 , HORVU3Hr1G064320.5
Wheat TraesCS1A02G186300 , TraesCS3A02G260800 , TraesCS1D02G190300
Populus -


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cDNA sequences
Sobic.003G187100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
2 Sobic.003G395500 expressed protein -
3 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
4 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
5 Sobic.009G015000 expressed protein -
6 Sobic.003G057366 - K11254: histone H4
7 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
8 Sobic.004G128000 expressed protein -
9 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
10 Sobic.003G338966 - -
11 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
12 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
14 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
16 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
17 Sobic.009G206700 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
18 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
19 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
20 Sobic.002G390600 sec20 domain containing protein, expressed K08494: novel plant SNARE


Gene co-expression network
sample Sobic003G187100 Sobic003G187100 Sobic007G172300 Sobic007G172300 Sobic003G187100--Sobic007G172300 Sobic003G395500 Sobic003G395500 Sobic003G187100--Sobic003G395500 Sobic004G259700 Sobic004G259700 Sobic003G187100--Sobic004G259700 Sobic009G167500 Sobic009G167500 Sobic003G187100--Sobic009G167500 Sobic009G015000 Sobic009G015000 Sobic003G187100--Sobic009G015000 Sobic003G057366 Sobic003G057366 Sobic003G187100--Sobic003G057366 Sobic001G041000 Sobic001G041000 Sobic003G187100--Sobic001G041000 Sobic004G128000 Sobic004G128000 Sobic003G187100--Sobic004G128000 Sobic004G099500 Sobic004G099500 Sobic003G187100--Sobic004G099500 Sobic007G172300--Sobic003G395500 Sobic007G172300--Sobic009G015000 Sobic007G172300--Sobic003G187100 Sobic007G172300--Sobic003G057366 Sobic007G172300--Sobic004G128000 Sobic007G172300--Sobic004G259700 Sobic001G416900 Sobic001G416900 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic001G416800 Sobic001G416800 Sobic007G172300--Sobic001G416800 Sobic003G395500--Sobic007G172300 Sobic003G395500--Sobic009G015000 Sobic003G395500--Sobic004G099500 Sobic003G395500--Sobic004G259700 Sobic003G395500--Sobic003G187100 Sobic001G239400 Sobic001G239400 Sobic003G395500--Sobic001G239400 Sobic002G005400 Sobic002G005400 Sobic003G395500--Sobic002G005400 Sobic005G198300 Sobic005G198300 Sobic003G395500--Sobic005G198300 Sobic006G003000 Sobic006G003000 Sobic003G395500--Sobic006G003000 Sobic004G259700--Sobic001G416900 Sobic004G259700--Sobic009G167500 Sobic009G123000 Sobic009G123000 Sobic004G259700--Sobic009G123000 Sobic004G259700--Sobic004G099500 Sobic004G259700--Sobic001G416800 Sobic003G127600 Sobic003G127600 Sobic004G259700--Sobic003G127600 Sobic004G259700--Sobic007G172300 Sobic004G259700--Sobic003G057366 Sobic007G168400 Sobic007G168400 Sobic004G259700--Sobic007G168400 Sobic001G009700 Sobic001G009700 Sobic009G167500--Sobic001G009700 Sobic009G167500--Sobic003G057366 Sobic009G167500--Sobic001G416900 Sobic009G167500--Sobic004G259700 Sobic002G276000 Sobic002G276000 Sobic009G167500--Sobic002G276000 Sobic010G013100 Sobic010G013100 Sobic009G167500--Sobic010G013100 Sobic003G057100 Sobic003G057100 Sobic009G167500--Sobic003G057100 Sobic001G054800 Sobic001G054800 Sobic009G167500--Sobic001G054800 Sobic009G167500--Sobic003G127600 Sobic010G057100 Sobic010G057100 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic009G015000--Sobic004G128000 Sobic009G015000--Sobic007G172300 Sobic004G335600 Sobic004G335600 Sobic009G015000--Sobic004G335600 Sobic003G322532 Sobic003G322532 Sobic009G015000--Sobic003G322532 Sobic002G253000 Sobic002G253000 Sobic009G015000--Sobic002G253000 Sobic009G015000--Sobic003G057366 Sobic009G015000--Sobic003G395500 Sobic003G057366--Sobic009G167500 Sobic003G057366--Sobic010G057100 Sobic003G057366--Sobic004G099500 Sobic003G057366--Sobic001G416900 Sobic003G057366--Sobic009G015000 Sobic003G057366--Sobic001G416800 Sobic003G057366--Sobic007G172300 Sobic002G050400 Sobic002G050400 Sobic003G057366--Sobic002G050400 Sobic003G057366--Sobic001G009700 Sobic001G041000--Sobic009G015000 Sobic001G041000--Sobic002G253000 Sobic001G041000--Sobic004G128000 Sobic001G041000--Sobic010G057100 Sobic001G041000--Sobic004G099500 Sobic006G244800 Sobic006G244800 Sobic001G041000--Sobic006G244800 Sobic001G041000--Sobic007G168400 Sobic001G041000--Sobic003G187100 Sobic001G041000--Sobic004G259700 Sobic004G128000--Sobic009G015000 Sobic004G128000--Sobic010G057100 Sobic004G128000--Sobic004G099500 Sobic004G128000--Sobic007G172300 Sobic009G206700 Sobic009G206700 Sobic004G128000--Sobic009G206700 Sobic007G045700 Sobic007G045700 Sobic004G128000--Sobic007G045700 Sobic004G128000--Sobic002G253000 Sobic003G338966 Sobic003G338966 Sobic004G128000--Sobic003G338966 Sobic009G177700 Sobic009G177700 Sobic004G128000--Sobic009G177700 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic004G099500--Sobic009G015000 Sobic004G099500--Sobic003G338966 Sobic008G172100 Sobic008G172100 Sobic004G099500--Sobic008G172100 Sobic004G099500--Sobic007G045700 Sobic004G099500--Sobic003G057366 Sobic004G271400 Sobic004G271400 Sobic004G099500--Sobic004G271400 Sobic004G099500--Sobic003G322532
Octagon: transcription factors


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