Gene annotation
Transcriptome id Sobic.009G206700.1
Synonym Sb09g026340
Functional annotation proteasome maturation factor UMP1 family protein, expressed
UniProt C5Z1G3
Pfam PF05348
Panther DB PTHR12828 PTHR12828:SF3
NCBI CDD KOG3061; Proteasome maturation factor
KEGG Orthology K11599; POMP, proteasome maturation protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67250 : Proteasome maturation factor UMP1
RAP-DB (Rice) LOC_Os02g55640.1 : proteasome maturation factor UMP1 family protein, expressed
MaizeGDB (Corn) Zm00025a022503 , Zm00025a038001
Brachypodium KQK01192
Barley HORVU2Hr1G033730.9 , HORVU2Hr1G033730.1 , HORVU2Hr1G033730.4 , HORVU2Hr1G033730.6 , HORVU2Hr1G033730.7 , HORVU2Hr1G033730.2 , HORVU2Hr1G033730.12 , HORVU2Hr1G033730.11 , HORVU4Hr1G082980.3 , HORVU4Hr1G082980.2
Wheat TraesCS5A02G491000 , TraesCS4B02G321100 , TraesCS4D02G317600 , TraesCS6A02G367200
Populus -


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cDNA sequences
Sobic.009G206700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
2 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
3 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
4 Sobic.002G246200 expressed protein -
5 Sobic.004G244800 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
6 Sobic.009G212200 expressed protein -
7 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
8 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
9 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
10 Sobic.003G043700 expressed protein -
11 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
12 Sobic.004G128000 expressed protein -
13 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
14 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
15 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
16 Sobic.001G304400 expressed protein -
17 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
18 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
19 Sobic.004G060500 fiber protein Fb15, putative, expressed -
20 Sobic.007G211500 expressed protein -


Gene co-expression network
sample Sobic009G206700 Sobic009G206700 Sobic006G057200 Sobic006G057200 Sobic009G206700--Sobic006G057200 Sobic010G264300 Sobic010G264300 Sobic009G206700--Sobic010G264300 Sobic001G286200 Sobic001G286200 Sobic009G206700--Sobic001G286200 Sobic002G246200 Sobic002G246200 Sobic009G206700--Sobic002G246200 Sobic004G244800 Sobic004G244800 Sobic009G206700--Sobic004G244800 Sobic009G212200 Sobic009G212200 Sobic009G206700--Sobic009G212200 Sobic001G519000 Sobic001G519000 Sobic009G206700--Sobic001G519000 Sobic001G175300 Sobic001G175300 Sobic009G206700--Sobic001G175300 Sobic002G356400 Sobic002G356400 Sobic009G206700--Sobic002G356400 Sobic002G179300 Sobic002G179300 Sobic006G057200--Sobic002G179300 Sobic007G178600 Sobic007G178600 Sobic006G057200--Sobic007G178600 Sobic010G069400 Sobic010G069400 Sobic006G057200--Sobic010G069400 Sobic004G008400 Sobic004G008400 Sobic006G057200--Sobic004G008400 Sobic006G057200--Sobic004G244800 Sobic010G070500 Sobic010G070500 Sobic006G057200--Sobic010G070500 Sobic001G508900 Sobic001G508900 Sobic006G057200--Sobic001G508900 Sobic002G286900 Sobic002G286900 Sobic006G057200--Sobic002G286900 Sobic003G078200 Sobic003G078200 Sobic006G057200--Sobic003G078200 Sobic010G264300--Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic010G264300--Sobic002G078300 Sobic002G308300 Sobic002G308300 Sobic010G264300--Sobic002G308300 Sobic010G264300--Sobic001G519000 Sobic010G264300--Sobic002G356400 Sobic010G264300--Sobic009G212200 Sobic001G370700 Sobic001G370700 Sobic010G264300--Sobic001G370700 Sobic001G304400 Sobic001G304400 Sobic010G264300--Sobic001G304400 Sobic002G180300 Sobic002G180300 Sobic010G264300--Sobic002G180300 Sobic001G286200--Sobic002G078300 Sobic001G286200--Sobic010G264300 Sobic001G286200--Sobic001G304400 Sobic007G211500 Sobic007G211500 Sobic001G286200--Sobic007G211500 Sobic002G296200 Sobic002G296200 Sobic001G286200--Sobic002G296200 Sobic007G134900 Sobic007G134900 Sobic001G286200--Sobic007G134900 Sobic001G286200--Sobic009G212200 Sobic001G286200--Sobic002G308300 Sobic002G263100 Sobic002G263100 Sobic001G286200--Sobic002G263100 Sobic002G246200--Sobic007G211500 Sobic001G110000 Sobic001G110000 Sobic002G246200--Sobic001G110000 Sobic002G246200--Sobic002G078300 Sobic004G260200 Sobic004G260200 Sobic002G246200--Sobic004G260200 Sobic002G246200--Sobic002G263100 Sobic002G246200--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G246200--Sobic001G404800 Sobic001G047800 Sobic001G047800 Sobic002G246200--Sobic001G047800 Sobic002G246200--Sobic009G206700 Sobic004G244800--Sobic006G057200 Sobic004G244800--Sobic002G179300 Sobic004G244800--Sobic010G069400 Sobic001G510800 Sobic001G510800 Sobic004G244800--Sobic001G510800 Sobic001G225700 Sobic001G225700 Sobic004G244800--Sobic001G225700 Sobic008G108601 Sobic008G108601 Sobic004G244800--Sobic008G108601 Sobic008G135000 Sobic008G135000 Sobic004G244800--Sobic008G135000 Sobic004G244800--Sobic001G175300 Sobic002G049300 Sobic002G049300 Sobic004G244800--Sobic002G049300 Sobic009G212200--Sobic001G286200 Sobic003G215700 Sobic003G215700 Sobic009G212200--Sobic003G215700 Sobic009G212200--Sobic001G304400 Sobic003G443300 Sobic003G443300 Sobic009G212200--Sobic003G443300 Sobic009G212200--Sobic002G356400 Sobic009G212200--Sobic010G264300 Sobic001G134400 Sobic001G134400 Sobic009G212200--Sobic001G134400 Sobic003G249700 Sobic003G249700 Sobic009G212200--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic009G212200--Sobic009G076400 Sobic001G519000--Sobic007G134900 Sobic004G060500 Sobic004G060500 Sobic001G519000--Sobic004G060500 Sobic001G519000--Sobic003G215700 Sobic001G519000--Sobic001G047800 Sobic001G519000--Sobic002G263100 Sobic001G519000--Sobic010G264300 Sobic002G309700 Sobic002G309700 Sobic001G519000--Sobic002G309700 Sobic001G519000--Sobic002G296200 Sobic009G173500 Sobic009G173500 Sobic001G519000--Sobic009G173500 Sobic010G206200 Sobic010G206200 Sobic001G175300--Sobic010G206200 Sobic001G403500 Sobic001G403500 Sobic001G175300--Sobic001G403500 Sobic004G198400 Sobic004G198400 Sobic001G175300--Sobic004G198400 Sobic009G050300 Sobic009G050300 Sobic001G175300--Sobic009G050300 Sobic001G175300--Sobic003G078200 Sobic009G054800 Sobic009G054800 Sobic001G175300--Sobic009G054800 Sobic001G175300--Sobic002G286900 Sobic009G242300 Sobic009G242300 Sobic001G175300--Sobic009G242300 Sobic002G372400 Sobic002G372400 Sobic001G175300--Sobic002G372400 Sobic002G356400--Sobic002G309700 Sobic001G465800 Sobic001G465800 Sobic002G356400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic002G356400--Sobic009G119900 Sobic001G350600 Sobic001G350600 Sobic002G356400--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic002G356400--Sobic004G170400 Sobic002G356400--Sobic004G260200 Sobic002G356400--Sobic001G404800 Sobic004G259200 Sobic004G259200 Sobic002G356400--Sobic004G259200 Sobic003G209000 Sobic003G209000 Sobic002G356400--Sobic003G209000
Octagon: transcription factors


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