Gene annotation
Transcriptome id Sobic.004G244800.1
Synonym Sb04g028530
Functional annotation ribosomal protein, putative, expressed
UniProt C5XZ84
Pfam PF01201
Panther DB PTHR10394
NCBI CDD KOG3283; 40S ribosomal protein S8
KEGG Orthology K02995; RP-S8e, small subunit ribosomal protein S8e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT5G59240 : Ribosomal protein S8e family protein
RAP-DB (Rice) LOC_Os04g28180.1 : ribosomal protein, putative, expressed
MaizeGDB (Corn) Zm00025a034619 , Zm00025a030556 , Zm00025a034620 , Zm00025a034621 , Zm00025a005851 , Zm00025a034624 , Zm00025a034625
Brachypodium KQJ99503 , KQK19932 , KQJ99504
Barley -
Wheat TraesCS2A02G276100 , TraesCS2D02G275100 , TraesCS2B02G293800 , TraesCS2B02G293800 , TraesCS2B02G293800
Populus -


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cDNA sequences
Sobic.004G244800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
2 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
3 Sobic.010G069400 60S ribosomal protein L19-3, putative, expressed K02885: RP-L19e, large subunit ribosomal protein L19e
4 Sobic.001G510800 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
5 Sobic.001G225700 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
6 Sobic.008G108601 - K02980: RP-S29e, small subunit ribosomal protein S29e
7 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
8 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
9 Sobic.002G049300 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
10 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
11 Sobic.003G338966 - -
12 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
13 Sobic.004G322200 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
14 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
15 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
16 Sobic.006G201500 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
17 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
18 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e
19 Sobic.007G138700 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
20 Sobic.009G022400 ribosomal protein L13, putative, expressed K02872: RP-L13Ae, large subunit ribosomal protein L13Ae


Gene co-expression network
sample Sobic004G244800 Sobic004G244800 Sobic006G057200 Sobic006G057200 Sobic004G244800--Sobic006G057200 Sobic002G179300 Sobic002G179300 Sobic004G244800--Sobic002G179300 Sobic010G069400 Sobic010G069400 Sobic004G244800--Sobic010G069400 Sobic001G510800 Sobic001G510800 Sobic004G244800--Sobic001G510800 Sobic001G225700 Sobic001G225700 Sobic004G244800--Sobic001G225700 Sobic008G108601 Sobic008G108601 Sobic004G244800--Sobic008G108601 Sobic008G135000 Sobic008G135000 Sobic004G244800--Sobic008G135000 Sobic001G175300 Sobic001G175300 Sobic004G244800--Sobic001G175300 Sobic002G049300 Sobic002G049300 Sobic004G244800--Sobic002G049300 Sobic006G057200--Sobic002G179300 Sobic007G178600 Sobic007G178600 Sobic006G057200--Sobic007G178600 Sobic006G057200--Sobic010G069400 Sobic004G008400 Sobic004G008400 Sobic006G057200--Sobic004G008400 Sobic006G057200--Sobic004G244800 Sobic010G070500 Sobic010G070500 Sobic006G057200--Sobic010G070500 Sobic001G508900 Sobic001G508900 Sobic006G057200--Sobic001G508900 Sobic002G286900 Sobic002G286900 Sobic006G057200--Sobic002G286900 Sobic003G078200 Sobic003G078200 Sobic006G057200--Sobic003G078200 Sobic002G179300--Sobic010G070500 Sobic002G179300--Sobic004G008400 Sobic002G179300--Sobic002G286900 Sobic002G179300--Sobic008G108601 Sobic002G179300--Sobic007G178600 Sobic002G179300--Sobic006G057200 Sobic003G387900 Sobic003G387900 Sobic002G179300--Sobic003G387900 Sobic002G179300--Sobic001G510800 Sobic001G334300 Sobic001G334300 Sobic002G179300--Sobic001G334300 Sobic010G069400--Sobic003G387900 Sobic009G233400 Sobic009G233400 Sobic010G069400--Sobic009G233400 Sobic001G039400 Sobic001G039400 Sobic010G069400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic010G069400--Sobic005G050500 Sobic002G304900 Sobic002G304900 Sobic010G069400--Sobic002G304900 Sobic002G047600 Sobic002G047600 Sobic010G069400--Sobic002G047600 Sobic004G349700 Sobic004G349700 Sobic010G069400--Sobic004G349700 Sobic002G056200 Sobic002G056200 Sobic010G069400--Sobic002G056200 Sobic001G085400 Sobic001G085400 Sobic010G069400--Sobic001G085400 Sobic010G005300 Sobic010G005300 Sobic001G510800--Sobic010G005300 Sobic001G510800--Sobic002G179300 Sobic001G058900 Sobic001G058900 Sobic001G510800--Sobic001G058900 Sobic008G100000 Sobic008G100000 Sobic001G510800--Sobic008G100000 Sobic001G510800--Sobic008G108601 Sobic001G510800--Sobic001G225700 Sobic002G415500 Sobic002G415500 Sobic001G510800--Sobic002G415500 Sobic001G510800--Sobic006G057200 Sobic009G227400 Sobic009G227400 Sobic001G510800--Sobic009G227400 Sobic003G249700 Sobic003G249700 Sobic001G225700--Sobic003G249700 Sobic006G081100 Sobic006G081100 Sobic001G225700--Sobic006G081100 Sobic001G225700--Sobic008G108601 Sobic001G225700--Sobic007G178600 Sobic001G225700--Sobic002G047600 Sobic001G225700--Sobic002G286900 Sobic001G225700--Sobic002G049300 Sobic010G251600 Sobic010G251600 Sobic001G225700--Sobic010G251600 Sobic002G115000 Sobic002G115000 Sobic001G225700--Sobic002G115000 Sobic008G108601--Sobic007G178600 Sobic008G108601--Sobic004G008400 Sobic008G108601--Sobic002G286900 Sobic008G108601--Sobic003G249700 Sobic008G108601--Sobic002G047600 Sobic007G019400 Sobic007G019400 Sobic008G108601--Sobic007G019400 Sobic010G206200 Sobic010G206200 Sobic008G108601--Sobic010G206200 Sobic008G108601--Sobic002G049300 Sobic001G226500 Sobic001G226500 Sobic008G108601--Sobic001G226500 Sobic008G135000--Sobic001G058900 Sobic008G135000--Sobic009G233400 Sobic008G135000--Sobic002G304900 Sobic008G135000--Sobic002G115000 Sobic001G057300 Sobic001G057300 Sobic008G135000--Sobic001G057300 Sobic009G191200 Sobic009G191200 Sobic008G135000--Sobic009G191200 Sobic008G135000--Sobic001G334300 Sobic008G135000--Sobic001G085400 Sobic008G135000--Sobic010G069400 Sobic001G175300--Sobic010G206200 Sobic001G403500 Sobic001G403500 Sobic001G175300--Sobic001G403500 Sobic004G198400 Sobic004G198400 Sobic001G175300--Sobic004G198400 Sobic009G050300 Sobic009G050300 Sobic001G175300--Sobic009G050300 Sobic001G175300--Sobic003G078200 Sobic009G054800 Sobic009G054800 Sobic001G175300--Sobic009G054800 Sobic001G175300--Sobic002G286900 Sobic009G242300 Sobic009G242300 Sobic001G175300--Sobic009G242300 Sobic002G372400 Sobic002G372400 Sobic001G175300--Sobic002G372400 Sobic002G049300--Sobic001G085400 Sobic002G049300--Sobic007G178600 Sobic002G049300--Sobic002G047600 Sobic009G022400 Sobic009G022400 Sobic002G049300--Sobic009G022400 Sobic002G049300--Sobic008G108601 Sobic002G049300--Sobic003G249700 Sobic001G436200 Sobic001G436200 Sobic002G049300--Sobic001G436200 Sobic006G137100 Sobic006G137100 Sobic002G049300--Sobic006G137100 Sobic002G049300--Sobic002G286900
Octagon: transcription factors


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