Gene annotation
Transcriptome id Sobic.002G246200.1
Synonym Sb02g028260
Functional annotation expressed protein
UniProt C5X3W1
Pfam PF10183
Panther DB PTHR31339
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57785 : -
RAP-DB (Rice) LOC_Os09g31260.1 : expressed protein
MaizeGDB (Corn) Zm00025a047439 , Zm00025a005075 , Zm00025a005082
Brachypodium KQJ90742
Barley HORVU5Hr1G073100.1 , HORVU5Hr1G073100.2 , HORVU5Hr1G073100.3
Wheat -
Populus -


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cDNA sequences
Sobic.002G246200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G211500 expressed protein -
2 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
3 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
4 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
5 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
6 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
7 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
8 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
9 Sobic.009G206700 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
10 Sobic.010G015200 expressed protein -
11 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
12 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
13 Sobic.004G183200 expressed protein -
14 Sobic.001G100400 ribosomal protein L7/L12 C-terminal domain containing protein, expressed K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
15 Sobic.006G083500 SLL1 protein, putative, expressed -
16 Sobic.004G060500 fiber protein Fb15, putative, expressed -
17 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
18 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
19 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
20 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon


Gene co-expression network
sample Sobic002G246200 Sobic002G246200 Sobic007G211500 Sobic007G211500 Sobic002G246200--Sobic007G211500 Sobic001G110000 Sobic001G110000 Sobic002G246200--Sobic001G110000 Sobic002G078300 Sobic002G078300 Sobic002G246200--Sobic002G078300 Sobic004G260200 Sobic004G260200 Sobic002G246200--Sobic004G260200 Sobic002G263100 Sobic002G263100 Sobic002G246200--Sobic002G263100 Sobic001G286200 Sobic001G286200 Sobic002G246200--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G246200--Sobic001G404800 Sobic001G047800 Sobic001G047800 Sobic002G246200--Sobic001G047800 Sobic009G206700 Sobic009G206700 Sobic002G246200--Sobic009G206700 Sobic007G211500--Sobic001G286200 Sobic007G211500--Sobic002G078300 Sobic007G211500--Sobic002G246200 Sobic007G211500--Sobic002G263100 Sobic008G051800 Sobic008G051800 Sobic007G211500--Sobic008G051800 Sobic004G183200 Sobic004G183200 Sobic007G211500--Sobic004G183200 Sobic001G519000 Sobic001G519000 Sobic007G211500--Sobic001G519000 Sobic010G264300 Sobic010G264300 Sobic007G211500--Sobic010G264300 Sobic002G308300 Sobic002G308300 Sobic007G211500--Sobic002G308300 Sobic002G329900 Sobic002G329900 Sobic001G110000--Sobic002G329900 Sobic004G055100 Sobic004G055100 Sobic001G110000--Sobic004G055100 Sobic001G110000--Sobic001G404800 Sobic001G110000--Sobic002G246200 Sobic003G160700 Sobic003G160700 Sobic001G110000--Sobic003G160700 Sobic003G215700 Sobic003G215700 Sobic001G110000--Sobic003G215700 Sobic003G209000 Sobic003G209000 Sobic001G110000--Sobic003G209000 Sobic002G418400 Sobic002G418400 Sobic001G110000--Sobic002G418400 Sobic001G110000--Sobic001G047800 Sobic002G078300--Sobic001G286200 Sobic002G078300--Sobic010G264300 Sobic002G078300--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic002G078300--Sobic002G395000 Sobic002G309700 Sobic002G309700 Sobic002G078300--Sobic002G309700 Sobic002G078300--Sobic007G211500 Sobic002G356400 Sobic002G356400 Sobic002G078300--Sobic002G356400 Sobic001G370700 Sobic001G370700 Sobic002G078300--Sobic001G370700 Sobic002G078300--Sobic002G308300 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic004G260200--Sobic009G215300 Sobic004G260200--Sobic002G263100 Sobic001G074700 Sobic001G074700 Sobic004G260200--Sobic001G074700 Sobic007G134900 Sobic007G134900 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic003G296800 Sobic003G296800 Sobic002G263100--Sobic003G296800 Sobic002G263100--Sobic003G215700 Sobic002G263100--Sobic001G286200 Sobic002G263100--Sobic001G404800 Sobic001G286200--Sobic002G078300 Sobic001G286200--Sobic010G264300 Sobic001G304400 Sobic001G304400 Sobic001G286200--Sobic001G304400 Sobic001G286200--Sobic007G211500 Sobic002G296200 Sobic002G296200 Sobic001G286200--Sobic002G296200 Sobic001G286200--Sobic007G134900 Sobic009G212200 Sobic009G212200 Sobic001G286200--Sobic009G212200 Sobic001G286200--Sobic002G308300 Sobic001G286200--Sobic002G263100 Sobic001G404800--Sobic003G209000 Sobic004G259200 Sobic004G259200 Sobic001G404800--Sobic004G259200 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic001G404800--Sobic002G418400 Sobic001G404800--Sobic002G356400 Sobic001G404800--Sobic002G309700 Sobic006G083500 Sobic006G083500 Sobic001G404800--Sobic006G083500 Sobic001G404800--Sobic004G260200 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic006G057200 Sobic006G057200 Sobic009G206700--Sobic006G057200 Sobic009G206700--Sobic010G264300 Sobic009G206700--Sobic001G286200 Sobic009G206700--Sobic002G246200 Sobic004G244800 Sobic004G244800 Sobic009G206700--Sobic004G244800 Sobic009G206700--Sobic009G212200 Sobic009G206700--Sobic001G519000 Sobic001G175300 Sobic001G175300 Sobic009G206700--Sobic001G175300 Sobic009G206700--Sobic002G356400
Octagon: transcription factors


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