Gene annotation
Transcriptome id Sobic.010G015200.1
Synonym Sb10g001510
Functional annotation expressed protein
UniProt C5Z2W6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g03486.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK19631
Barley HORVU7Hr1G009340.1
Wheat TraesCS7A02G052000 , TraesCS4A02G439500 , TraesCSU02G102500
Populus -


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cDNA sequences
Sobic.010G015200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G246200 expressed protein -
2 Sobic.010G031000 expressed protein -
3 Sobic.007G211500 expressed protein -
4 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
5 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
6 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
7 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
8 Sobic.006G180600 expressed protein -
9 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
10 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
11 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
12 Sobic.008G051800 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
13 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
14 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
15 Sobic.002G136700 expressed protein -
16 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
17 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
18 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
19 Sobic.004G060500 fiber protein Fb15, putative, expressed -
20 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6


Gene co-expression network
sample Sobic010G015200 Sobic010G015200 Sobic002G246200 Sobic002G246200 Sobic010G015200--Sobic002G246200 Sobic010G031000 Sobic010G031000 Sobic010G015200--Sobic010G031000 Sobic007G211500 Sobic007G211500 Sobic010G015200--Sobic007G211500 Sobic001G077000 Sobic001G077000 Sobic010G015200--Sobic001G077000 Sobic001G404800 Sobic001G404800 Sobic010G015200--Sobic001G404800 Sobic004G260200 Sobic004G260200 Sobic010G015200--Sobic004G260200 Sobic003G218400 Sobic003G218400 Sobic010G015200--Sobic003G218400 Sobic006G180600 Sobic006G180600 Sobic010G015200--Sobic006G180600 Sobic001G074700 Sobic001G074700 Sobic010G015200--Sobic001G074700 Sobic002G246200--Sobic007G211500 Sobic001G110000 Sobic001G110000 Sobic002G246200--Sobic001G110000 Sobic002G078300 Sobic002G078300 Sobic002G246200--Sobic002G078300 Sobic002G246200--Sobic004G260200 Sobic002G263100 Sobic002G263100 Sobic002G246200--Sobic002G263100 Sobic001G286200 Sobic001G286200 Sobic002G246200--Sobic001G286200 Sobic002G246200--Sobic001G404800 Sobic001G047800 Sobic001G047800 Sobic002G246200--Sobic001G047800 Sobic009G206700 Sobic009G206700 Sobic002G246200--Sobic009G206700 Sobic009G069600 Sobic009G069600 Sobic010G031000--Sobic009G069600 Sobic003G273000 Sobic003G273000 Sobic010G031000--Sobic003G273000 Sobic010G031000--Sobic004G260200 Sobic001G197000 Sobic001G197000 Sobic010G031000--Sobic001G197000 Sobic010G031000--Sobic001G404800 Sobic010G031000--Sobic001G047800 Sobic001G508466 Sobic001G508466 Sobic010G031000--Sobic001G508466 Sobic003G215700 Sobic003G215700 Sobic010G031000--Sobic003G215700 Sobic010G216400 Sobic010G216400 Sobic010G031000--Sobic010G216400 Sobic007G211500--Sobic001G286200 Sobic007G211500--Sobic002G078300 Sobic007G211500--Sobic002G246200 Sobic007G211500--Sobic002G263100 Sobic008G051800 Sobic008G051800 Sobic007G211500--Sobic008G051800 Sobic004G183200 Sobic004G183200 Sobic007G211500--Sobic004G183200 Sobic001G519000 Sobic001G519000 Sobic007G211500--Sobic001G519000 Sobic010G264300 Sobic010G264300 Sobic007G211500--Sobic010G264300 Sobic002G308300 Sobic002G308300 Sobic007G211500--Sobic002G308300 Sobic003G072300 Sobic003G072300 Sobic001G077000--Sobic003G072300 Sobic002G418400 Sobic002G418400 Sobic001G077000--Sobic002G418400 Sobic003G155400 Sobic003G155400 Sobic001G077000--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic001G077000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic001G077000--Sobic002G296200 Sobic006G083500 Sobic006G083500 Sobic001G077000--Sobic006G083500 Sobic001G077000--Sobic003G215700 Sobic004G060500 Sobic004G060500 Sobic001G077000--Sobic004G060500 Sobic003G296800 Sobic003G296800 Sobic001G077000--Sobic003G296800 Sobic001G404800--Sobic003G209000 Sobic004G259200 Sobic004G259200 Sobic001G404800--Sobic004G259200 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic001G404800--Sobic002G418400 Sobic002G356400 Sobic002G356400 Sobic001G404800--Sobic002G356400 Sobic002G309700 Sobic002G309700 Sobic001G404800--Sobic002G309700 Sobic001G404800--Sobic006G083500 Sobic001G404800--Sobic004G260200 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic002G395000 Sobic002G395000 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic004G260200--Sobic009G215300 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700 Sobic003G218400--Sobic001G047800 Sobic003G218400--Sobic004G260200 Sobic003G218400--Sobic002G309700 Sobic003G218400--Sobic002G418400 Sobic003G218400--Sobic003G215700 Sobic003G218400--Sobic001G404800 Sobic007G013900 Sobic007G013900 Sobic003G218400--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic003G218400--Sobic004G170400 Sobic003G218400--Sobic001G074700 Sobic006G180600--Sobic002G246200 Sobic001G100400 Sobic001G100400 Sobic006G180600--Sobic001G100400 Sobic006G180600--Sobic010G015200 Sobic006G180600--Sobic007G211500 Sobic002G384200 Sobic002G384200 Sobic006G180600--Sobic002G384200 Sobic010G199100 Sobic010G199100 Sobic006G180600--Sobic010G199100 Sobic001G533300 Sobic001G533300 Sobic006G180600--Sobic001G533300 Sobic007G091000 Sobic007G091000 Sobic006G180600--Sobic007G091000 Sobic001G441000 Sobic001G441000 Sobic006G180600--Sobic001G441000 Sobic001G074700--Sobic004G170400 Sobic001G350600 Sobic001G350600 Sobic001G074700--Sobic001G350600 Sobic001G074700--Sobic004G259200 Sobic001G074700--Sobic002G309700 Sobic010G154700 Sobic010G154700 Sobic001G074700--Sobic010G154700 Sobic001G074700--Sobic002G296200 Sobic009G119900 Sobic009G119900 Sobic001G074700--Sobic009G119900 Sobic001G074700--Sobic001G047800 Sobic001G074700--Sobic002G418400
Octagon: transcription factors


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