Gene annotation
Transcriptome id Sobic.002G291066.1
Synonym -
Functional annotation -
UniProt C5WTL6 , A0A1W0W662
Pfam PF15511
Panther DB PTHR10484
NCBI CDD KOG3467; Histone H4
KEGG Orthology K11254; histone H4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59970 : Histone superfamily protein
RAP-DB (Rice) LOC_Os09g38020.1 : Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a026958 , Zm00025a000277 , Zm00025a048010 , Zm00025a047950 , Zm00025a010066 , Zm00025a013952 , Zm00025a056690 , Zm00025a010063 , Zm00025a037747 , Zm00025a032342 , Zm00025a047110 , Zm00025a035684 , Zm00025a039706
Brachypodium KQJ90348 , KQK05829 , PNT69244 , KQK05861 , PNT61710 , KQJ86516 , KQK12788 , PNT73988 , KQJ84202
Barley HORVU6Hr1G066400.1 , HORVU6Hr1G066400.2 , HORVU6Hr1G066400.3 , HORVU7Hr1G100410.1 , HORVU6Hr1G011020.4 , HORVU6Hr1G011020.5 , HORVU1Hr1G071760.1 , HORVU6Hr1G011020.1 , HORVU6Hr1G011020.2 , HORVU6Hr1G011020.3 , HORVU2Hr1G098340.4 , HORVU2Hr1G098340.2 , HORVU2Hr1G098340.3 , HORVU2Hr1G098340.1 , HORVU1Hr1G090300.5 , HORVU1Hr1G090300.4 , HORVU1Hr1G090300.7 , HORVU1Hr1G090300.6 , HORVU1Hr1G090300.1 , HORVU1Hr1G090300.3 , HORVU1Hr1G090300.2 , HORVU1Hr1G090300.9 , HORVU1Hr1G090300.8 , HORVU2Hr1G040050.1 , HORVU1Hr1G090300.46 , HORVU1Hr1G090300.47 , HORVU1Hr1G080200.3 , HORVU1Hr1G090300.45 , HORVU1Hr1G029090.1 , HORVU1Hr1G029090.2 , HORVU5Hr1G086620.1 , HORVU2Hr1G099490.1 , HORVU5Hr1G086620.3 , HORVU5Hr1G086620.2 , HORVU5Hr1G086620.5 , HORVU5Hr1G086620.4 , HORVU5Hr1G086620.6 , HORVU2Hr1G098320.1 , HORVU1Hr1G071760.2 , HORVU2Hr1G099490.2 , HORVU1Hr1G071760.3 , HORVU3Hr1G088160.2 , HORVU3Hr1G088160.1 , HORVU1Hr1G071190.2 , HORVU1Hr1G079440.2 , HORVU1Hr1G079440.1 , HORVU2Hr1G099490.3 , HORVU1Hr1G071190.1 , HORVU1Hr1G071190.3 , HORVU1Hr1G066960.1 , HORVU1Hr1G052030.1 , HORVU1Hr1G071780.44 , HORVU1Hr1G090300.11 , HORVU1Hr1G090300.10 , HORVU1Hr1G020060.1 , HORVU1Hr1G090300.12 , HORVU6Hr1G029210.1 , HORVU6Hr1G029210.2 , HORVU6Hr1G029210.3 , HORVU4Hr1G063260.1 , HORVU2Hr1G106590.1 , HORVU4Hr1G063260.2 , HORVU1Hr1G090300.42 , HORVU1Hr1G090300.43 , HORVU1Hr1G090300.40 , HORVU1Hr1G090300.41 , HORVU1Hr1G080200.1 , HORVU6Hr1G011510.1 , HORVU6Hr1G011510.2 , HORVU1Hr1G080200.2 , HORVU1Hr1G090300.19 , HORVU1Hr1G090300.18 , HORVU1Hr1G090300.24 , HORVU1Hr1G090300.25 , HORVU2Hr1G097990.2 , HORVU1Hr1G090300.44 , HORVU2Hr1G097990.1 , HORVU1Hr1G090300.26 , HORVU1Hr1G090300.39 , HORVU1Hr1G090300.38 , HORVU1Hr1G090300.37 , HORVU1Hr1G090300.36 , HORVU1Hr1G090300.35 , HORVU1Hr1G090300.34 , HORVU1Hr1G090300.33 , HORVU1Hr1G090300.32 , HORVU1Hr1G090300.31 , HORVU1Hr1G090300.30 , HORVU1Hr1G070700.3 , HORVU1Hr1G052030.2 , HORVU1Hr1G071210.2 , HORVU1Hr1G071210.3 , HORVU1Hr1G071210.1 , HORVU1Hr1G070700.2 , HORVU1Hr1G071210.4 , HORVU1Hr1G071210.5 , HORVU1Hr1G017830.1 , HORVU3Hr1G023460.1 , HORVU3Hr1G023460.2 , HORVU1Hr1G070700.1 , HORVU1Hr1G090300.28 , HORVU1Hr1G090300.29 , HORVU5Hr1G087870.3 , HORVU5Hr1G087870.2 , HORVU5Hr1G087870.1 , HORVU1Hr1G090300.27 , HORVU1Hr1G090300.20 , HORVU1Hr1G090300.21 , HORVU1Hr1G090300.22 , HORVU1Hr1G090300.23 , HORVU7Hr1G043300.1 , HORVU1Hr1G073680.1 , HORVU6Hr1G011710.1 , HORVU5Hr1G087830.1 , HORVU2Hr1G093680.4 , HORVU2Hr1G093680.2 , HORVU2Hr1G093680.3 , HORVU2Hr1G093680.1 , HORVU4Hr1G023200.3 , HORVU3Hr1G087170.1 , HORVU4Hr1G023200.2 , HORVU6Hr1G011780.1 , HORVU6Hr1G013530.1 , HORVU1Hr1G090300.13 , HORVU6Hr1G011780.2 , HORVU1Hr1G090300.15 , HORVU1Hr1G090300.14 , HORVU1Hr1G090300.17 , HORVU1Hr1G090300.16 , HORVU5Hr1G086630.2 , HORVU5Hr1G086630.3 , HORVU5Hr1G086630.1 , HORVU5Hr1G086630.6 , HORVU5Hr1G086630.7 , HORVU5Hr1G086630.4 , HORVU5Hr1G086630.5 , HORVU6Hr1G011540.2 , HORVU6Hr1G011540.1 , HORVU1Hr1G022390.2 , HORVU1Hr1G022390.1 , HORVU5Hr1G079130.2 , HORVU5Hr1G079130.1 , HORVU7Hr1G114720.1 , HORVU4Hr1G023200.1 , HORVU1Hr1G020040.1 , HORVU1Hr1G020040.2
Wheat TraesCS2D02G415000 , TraesCS7A02G408100 , TraesCS6B02G072500 , TraesCS2A02G203000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
2 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
3 Sobic.003G057100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
4 Sobic.006G186700 histone H1-3(PubMedID : 26465154)@histone H1, putative, expressed K11275: histone H1/5
5 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
6 Sobic.001G313200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
7 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
8 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
9 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
10 Sobic.003G338966 - -
11 Sobic.003G347900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
12 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.005G139075 - -
14 Sobic.002G318501 - -
15 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
16 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
17 Sobic.001G372100 beta-amylase 3(PubMedID : 26465154)@beta-amylase 3(PubMedID : 26465154)@beta-amylase, putative, expressed -
18 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
19 Sobic.010G221300 expressed protein -
20 Sobic.006G137800 expressed protein -


Gene co-expression network
sample Sobic002G291066 Sobic002G291066 Sobic001G054800 Sobic001G054800 Sobic002G291066--Sobic001G054800 Sobic001G529400 Sobic001G529400 Sobic002G291066--Sobic001G529400 Sobic003G057100 Sobic003G057100 Sobic002G291066--Sobic003G057100 Sobic006G186700 Sobic006G186700 Sobic002G291066--Sobic006G186700 Sobic002G276000 Sobic002G276000 Sobic002G291066--Sobic002G276000 Sobic001G313200 Sobic001G313200 Sobic002G291066--Sobic001G313200 Sobic007G198000 Sobic007G198000 Sobic002G291066--Sobic007G198000 Sobic010G047100 Sobic010G047100 Sobic002G291066--Sobic010G047100 Sobic010G057100 Sobic010G057100 Sobic002G291066--Sobic010G057100 Sobic001G054800--Sobic002G276000 Sobic001G054800--Sobic003G057100 Sobic001G054800--Sobic002G291066 Sobic001G054800--Sobic007G198000 Sobic001G009700 Sobic001G009700 Sobic001G054800--Sobic001G009700 Sobic001G054800--Sobic001G529400 Sobic003G347900 Sobic003G347900 Sobic001G054800--Sobic003G347900 Sobic009G167500 Sobic009G167500 Sobic001G054800--Sobic009G167500 Sobic001G054800--Sobic010G047100 Sobic001G529400--Sobic001G313200 Sobic001G529400--Sobic010G047100 Sobic006G191800 Sobic006G191800 Sobic001G529400--Sobic006G191800 Sobic009G015900 Sobic009G015900 Sobic001G529400--Sobic009G015900 Sobic001G529400--Sobic003G347900 Sobic010G221300 Sobic010G221300 Sobic001G529400--Sobic010G221300 Sobic003G078200 Sobic003G078200 Sobic001G529400--Sobic003G078200 Sobic006G137800 Sobic006G137800 Sobic001G529400--Sobic006G137800 Sobic001G529400--Sobic003G057100 Sobic003G057100--Sobic002G276000 Sobic003G057100--Sobic001G054800 Sobic003G057100--Sobic001G529400 Sobic003G057100--Sobic003G347900 Sobic003G057100--Sobic002G291066 Sobic003G057100--Sobic010G047100 Sobic003G057100--Sobic001G009700 Sobic003G057100--Sobic006G191800 Sobic004G170500 Sobic004G170500 Sobic003G057100--Sobic004G170500 Sobic006G186700--Sobic001G313200 Sobic001G372100 Sobic001G372100 Sobic006G186700--Sobic001G372100 Sobic006G274700 Sobic006G274700 Sobic006G186700--Sobic006G274700 Sobic006G186700--Sobic002G291066 Sobic006G186700--Sobic001G529400 Sobic006G186700--Sobic010G047100 Sobic004G335600 Sobic004G335600 Sobic006G186700--Sobic004G335600 Sobic001G247300 Sobic001G247300 Sobic006G186700--Sobic001G247300 Sobic005G186100 Sobic005G186100 Sobic006G186700--Sobic005G186100 Sobic002G276000--Sobic003G057100 Sobic002G276000--Sobic001G054800 Sobic002G276000--Sobic003G347900 Sobic002G276000--Sobic001G529400 Sobic002G276000--Sobic001G009700 Sobic002G276000--Sobic002G291066 Sobic002G276000--Sobic007G198000 Sobic010G047200 Sobic010G047200 Sobic002G276000--Sobic010G047200 Sobic002G276000--Sobic009G015900 Sobic001G313200--Sobic001G529400 Sobic001G313200--Sobic010G047100 Sobic004G203700 Sobic004G203700 Sobic001G313200--Sobic004G203700 Sobic004G041900 Sobic004G041900 Sobic001G313200--Sobic004G041900 Sobic009G145500 Sobic009G145500 Sobic001G313200--Sobic009G145500 Sobic003G125650 Sobic003G125650 Sobic001G313200--Sobic003G125650 Sobic001G313200--Sobic003G078200 Sobic004G271400 Sobic004G271400 Sobic001G313200--Sobic004G271400 Sobic001G313200--Sobic006G191800 Sobic007G198000--Sobic003G347900 Sobic006G057200 Sobic006G057200 Sobic007G198000--Sobic006G057200 Sobic007G198000--Sobic001G529400 Sobic010G070500 Sobic010G070500 Sobic007G198000--Sobic010G070500 Sobic003G160700 Sobic003G160700 Sobic007G198000--Sobic003G160700 Sobic007G198000--Sobic010G047100 Sobic001G475500 Sobic001G475500 Sobic007G198000--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic007G198000--Sobic003G027400 Sobic003G379600 Sobic003G379600 Sobic007G198000--Sobic003G379600 Sobic010G047100--Sobic001G313200 Sobic010G047100--Sobic001G529400 Sobic010G047100--Sobic004G041900 Sobic010G047100--Sobic006G191800 Sobic010G047100--Sobic010G221300 Sobic001G031700 Sobic001G031700 Sobic010G047100--Sobic001G031700 Sobic010G047100--Sobic003G160700 Sobic003G322532 Sobic003G322532 Sobic010G047100--Sobic003G322532 Sobic010G047100--Sobic003G125650 Sobic004G099500 Sobic004G099500 Sobic010G057100--Sobic004G099500 Sobic009G015000 Sobic009G015000 Sobic010G057100--Sobic009G015000 Sobic010G057100--Sobic004G335600 Sobic003G057366 Sobic003G057366 Sobic010G057100--Sobic003G057366 Sobic010G057100--Sobic003G322532 Sobic004G128000 Sobic004G128000 Sobic010G057100--Sobic004G128000 Sobic009G177700 Sobic009G177700 Sobic010G057100--Sobic009G177700 Sobic007G045700 Sobic007G045700 Sobic010G057100--Sobic007G045700 Sobic010G057100--Sobic001G313200
Octagon: transcription factors


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