Gene annotation
Transcriptome id Sobic.001G076800.1
Synonym Sb01g006940
Functional annotation expressed protein
UniProt C5WZ90
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76600 : -
RAP-DB (Rice) LOC_Os03g55880.1 : expressed protein
MaizeGDB (Corn) Zm00025a016702 , Zm00025a008322
Brachypodium KQK13009 , KQK20654
Barley HORVU2Hr1G061800.1 , HORVU5Hr1G098290.1 , HORVU5Hr1G098280.1
Wheat TraesCS5B02G408700
Populus -


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cDNA sequences
Sobic.001G076800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
3 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
4 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
5 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
6 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
7 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
8 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
9 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.001G169500 - -
11 Sobic.001G138600 VQ domain containing protein, putative, expressed -
12 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
14 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.001G004800 receptor protein kinase, putative, expressed -
17 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
18 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
20 Sobic.006G235100 expressed protein -


Gene co-expression network
sample Sobic001G076800 Sobic001G076800 Sobic005G011300 Sobic005G011300 Sobic001G076800--Sobic005G011300 Sobic001G502400 Sobic001G502400 Sobic001G076800--Sobic001G502400 Sobic002G188900 Sobic002G188900 Sobic001G076800--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic001G076800--Sobic004G141200 Sobic005G107900 Sobic005G107900 Sobic001G076800--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic001G076800--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic001G076800--Sobic001G313600 Sobic003G432700 Sobic003G432700 Sobic001G076800--Sobic003G432700 Sobic003G382800 Sobic003G382800 Sobic001G076800--Sobic003G382800 Sobic005G011300--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic005G011300--Sobic001G169500 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic001G502400--Sobic005G107900 Sobic001G502400--Sobic001G313600 Sobic006G235100 Sobic006G235100 Sobic001G502400--Sobic006G235100 Sobic001G502400--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic001G502400--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic001G502400--Sobic006G075400 Sobic009G188000 Sobic009G188000 Sobic001G502400--Sobic009G188000 Sobic001G502400--Sobic005G011300 Sobic006G007900 Sobic006G007900 Sobic001G502400--Sobic006G007900 Sobic002G188900--Sobic004G100700 Sobic002G188900--Sobic005G011300 Sobic003G033900 Sobic003G033900 Sobic002G188900--Sobic003G033900 Sobic002G188900--Sobic001G140900 Sobic002G188900--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic002G188900--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic002G188900--Sobic001G108200 Sobic004G304625 Sobic004G304625 Sobic002G188900--Sobic004G304625 Sobic007G057000 Sobic007G057000 Sobic002G188900--Sobic007G057000 Sobic003G369100 Sobic003G369100 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic007G074000 Sobic007G074000 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic005G107900--Sobic001G502400 Sobic005G107900--Sobic001G313600 Sobic005G107900--Sobic003G432700 Sobic005G107900--Sobic005G011300 Sobic005G107900--Sobic006G235100 Sobic005G107900--Sobic006G075400 Sobic005G107900--Sobic009G184000 Sobic005G107900--Sobic009G188000 Sobic005G107900--Sobic001G169500 Sobic004G100700--Sobic005G011300 Sobic004G100700--Sobic002G188900 Sobic004G100700--Sobic001G140900 Sobic004G100700--Sobic001G108200 Sobic004G100700--Sobic001G169500 Sobic004G100700--Sobic004G141200 Sobic004G100700--Sobic003G393900 Sobic004G301000 Sobic004G301000 Sobic004G100700--Sobic004G301000 Sobic001G367600 Sobic001G367600 Sobic004G100700--Sobic001G367600 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G304100 Sobic001G304100 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000 Sobic003G432700--Sobic005G107900 Sobic003G432700--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic003G432700--Sobic003G228900 Sobic003G432700--Sobic005G011300 Sobic003G432700--Sobic001G313600 Sobic003G432700--Sobic009G184000 Sobic003G432700--Sobic006G075400 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700 Sobic003G382800--Sobic001G138600 Sobic003G382800--Sobic004G141200 Sobic003G382800--Sobic001G169500 Sobic003G382800--Sobic001G108200 Sobic003G394400 Sobic003G394400 Sobic003G382800--Sobic003G394400 Sobic004G166200 Sobic004G166200 Sobic003G382800--Sobic004G166200 Sobic002G068600 Sobic002G068600 Sobic003G382800--Sobic002G068600 Sobic003G086600 Sobic003G086600 Sobic003G382800--Sobic003G086600 Sobic003G148600 Sobic003G148600 Sobic003G382800--Sobic003G148600
Octagon: transcription factors


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