Gene annotation
Transcriptome id Sobic.010G067300.1
Synonym Sb10g005850
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
UniProt C5Z5U5
Pfam PF08263 PF00560 PF00069
Panther DB PTHR27000 PTHR27000:SF126
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G24130 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os06g08690.1 : leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
MaizeGDB (Corn) Zm00025a049746 , Zm00025a049744 , Zm00025a029814 , Zm00025a041926
Brachypodium KQK19246 , KQK19243 , KQK19242
Barley HORVU7Hr1G030920.5 , HORVU7Hr1G030920.4 , HORVU7Hr1G030920.3 , HORVU7Hr1G030920.2 , HORVU5Hr1G061460.1 , HORVU7Hr1G030870.3 , HORVU7Hr1G030870.2 , HORVU7Hr1G030870.1
Wheat TraesCS7A02G018300 , TraesCS7A02G150600 , TraesCS7D02G152500 , TraesCS7B02G054500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
3 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
5 Sobic.006G092500 expressed protein -
6 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.010G212800 expressed protein -
8 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
9 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
10 Sobic.005G063100 expressed protein -
11 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
13 Sobic.002G354100 transporter family protein, putative, expressed -
14 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
15 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
16 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
17 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
18 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
19 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
20 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -


Gene co-expression network
sample Sobic010G067300 Sobic010G067300 Sobic002G245900 Sobic002G245900 Sobic010G067300--Sobic002G245900 Sobic010G067400 Sobic010G067400 Sobic010G067300--Sobic010G067400 Sobic006G277600 Sobic006G277600 Sobic010G067300--Sobic006G277600 Sobic010G184800 Sobic010G184800 Sobic010G067300--Sobic010G184800 Sobic006G092500 Sobic006G092500 Sobic010G067300--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic010G067300--Sobic009G111000 Sobic010G212800 Sobic010G212800 Sobic010G067300--Sobic010G212800 Sobic001G476500 Sobic001G476500 Sobic010G067300--Sobic001G476500 Sobic003G117600 Sobic003G117600 Sobic010G067300--Sobic003G117600 Sobic009G008300 Sobic009G008300 Sobic002G245900--Sobic009G008300 Sobic007G133600 Sobic007G133600 Sobic002G245900--Sobic007G133600 Sobic002G245900--Sobic010G067300 Sobic001G076800 Sobic001G076800 Sobic002G245900--Sobic001G076800 Sobic004G335600 Sobic004G335600 Sobic002G245900--Sobic004G335600 Sobic004G042700 Sobic004G042700 Sobic002G245900--Sobic004G042700 Sobic004G099500 Sobic004G099500 Sobic002G245900--Sobic004G099500 Sobic001G239400 Sobic001G239400 Sobic002G245900--Sobic001G239400 Sobic009G032700 Sobic009G032700 Sobic002G245900--Sobic009G032700 Sobic004G046200 Sobic004G046200 Sobic010G067400--Sobic004G046200 Sobic003G016100 Sobic003G016100 Sobic010G067400--Sobic003G016100 Sobic009G187200 Sobic009G187200 Sobic010G067400--Sobic009G187200 Sobic007G169900 Sobic007G169900 Sobic010G067400--Sobic007G169900 Sobic010G067400--Sobic010G184800 Sobic003G079400 Sobic003G079400 Sobic010G067400--Sobic003G079400 Sobic010G067400--Sobic006G277600 Sobic006G044100 Sobic006G044100 Sobic010G067400--Sobic006G044100 Sobic004G310200 Sobic004G310200 Sobic010G067400--Sobic004G310200 Sobic002G354100 Sobic002G354100 Sobic006G277600--Sobic002G354100 Sobic001G231700 Sobic001G231700 Sobic006G277600--Sobic001G231700 Sobic006G277600--Sobic003G117600 Sobic007G227300 Sobic007G227300 Sobic006G277600--Sobic007G227300 Sobic006G099900 Sobic006G099900 Sobic006G277600--Sobic006G099900 Sobic001G503100 Sobic001G503100 Sobic006G277600--Sobic001G503100 Sobic007G184600 Sobic007G184600 Sobic006G277600--Sobic007G184600 Sobic006G277600--Sobic009G111000 Sobic005G206601 Sobic005G206601 Sobic006G277600--Sobic005G206601 Sobic001G304100 Sobic001G304100 Sobic010G184800--Sobic001G304100 Sobic010G184800--Sobic009G111000 Sobic001G049900 Sobic001G049900 Sobic010G184800--Sobic001G049900 Sobic010G029700 Sobic010G029700 Sobic010G184800--Sobic010G029700 Sobic008G186100 Sobic008G186100 Sobic010G184800--Sobic008G186100 Sobic010G184800--Sobic001G231700 Sobic002G176100 Sobic002G176100 Sobic010G184800--Sobic002G176100 Sobic010G184800--Sobic004G046200 Sobic006G234800 Sobic006G234800 Sobic010G184800--Sobic006G234800 Sobic006G092500--Sobic001G476500 Sobic009G183400 Sobic009G183400 Sobic006G092500--Sobic009G183400 Sobic004G100700 Sobic004G100700 Sobic006G092500--Sobic004G100700 Sobic004G205100 Sobic004G205100 Sobic006G092500--Sobic004G205100 Sobic009G229000 Sobic009G229000 Sobic006G092500--Sobic009G229000 Sobic005G063100 Sobic005G063100 Sobic006G092500--Sobic005G063100 Sobic003G352300 Sobic003G352300 Sobic006G092500--Sobic003G352300 Sobic006G092500--Sobic003G117600 Sobic010G259600 Sobic010G259600 Sobic006G092500--Sobic010G259600 Sobic002G017800 Sobic002G017800 Sobic009G111000--Sobic002G017800 Sobic009G111000--Sobic002G176100 Sobic001G367600 Sobic001G367600 Sobic009G111000--Sobic001G367600 Sobic003G417200 Sobic003G417200 Sobic009G111000--Sobic003G417200 Sobic001G325400 Sobic001G325400 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic002G055700 Sobic002G055700 Sobic009G111000--Sobic002G055700 Sobic001G500000 Sobic001G500000 Sobic009G111000--Sobic001G500000 Sobic003G319500 Sobic003G319500 Sobic009G111000--Sobic003G319500 Sobic003G148300 Sobic003G148300 Sobic010G212800--Sobic003G148300 Sobic003G116800 Sobic003G116800 Sobic010G212800--Sobic003G116800 Sobic004G086400 Sobic004G086400 Sobic010G212800--Sobic004G086400 Sobic004G108200 Sobic004G108200 Sobic010G212800--Sobic004G108200 Sobic010G212800--Sobic010G184800 Sobic004G004500 Sobic004G004500 Sobic010G212800--Sobic004G004500 Sobic010G212800--Sobic008G186100 Sobic005G099000 Sobic005G099000 Sobic010G212800--Sobic005G099000 Sobic002G339000 Sobic002G339000 Sobic010G212800--Sobic002G339000 Sobic001G476500--Sobic006G092500 Sobic001G476500--Sobic009G183400 Sobic003G417800 Sobic003G417800 Sobic001G476500--Sobic003G417800 Sobic002G287100 Sobic002G287100 Sobic001G476500--Sobic002G287100 Sobic001G476500--Sobic004G100700 Sobic009G240600 Sobic009G240600 Sobic001G476500--Sobic009G240600 Sobic001G119400 Sobic001G119400 Sobic001G476500--Sobic001G119400 Sobic003G033900 Sobic003G033900 Sobic001G476500--Sobic003G033900 Sobic001G476500--Sobic001G500000 Sobic003G117600--Sobic006G277600 Sobic007G141500 Sobic007G141500 Sobic003G117600--Sobic007G141500 Sobic003G117600--Sobic005G063100 Sobic003G117600--Sobic006G092500 Sobic003G117600--Sobic005G206601 Sobic006G153100 Sobic006G153100 Sobic003G117600--Sobic006G153100 Sobic003G117600--Sobic001G325400 Sobic003G117600--Sobic002G354100 Sobic005G091500 Sobic005G091500 Sobic003G117600--Sobic005G091500
Octagon: transcription factors


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