Gene annotation
Transcriptome id Sobic.006G257100.1
Synonym Sb06g032050
Functional annotation dirigent-like protein pDIR17, putative, expressed
UniProt C5YA05
Pfam PF03018
Panther DB PTHR21495 PTHR21495:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42510 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os04g57130.1 : dirigent-like protein pDIR17, putative, expressed
MaizeGDB (Corn) Zm00025a009394
Brachypodium -
Barley HORVU7Hr1G116770.3 , HORVU7Hr1G116770.2 , HORVU7Hr1G116770.1 , HORVU7Hr1G116770.4
Wheat TraesCS7B02G444100 , TraesCS7A02G526800 , TraesCS7D02G515300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G076800 GIL1, putative, expressed -
2 Sobic.001G005000 receptor protein kinase, putative, expressed -
3 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.002G339400 expressed protein -
5 Sobic.010G014300 expressed protein -
6 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
7 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
8 Sobic.002G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.010G087200 expressed protein -
11 Sobic.002G005200 dirigent, putative, expressed -
12 Sobic.010G099600 expressed protein -
13 Sobic.010G194500 expansin precursor, putative, expressed -
14 Sobic.001G494150 - -
15 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
20 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase


Gene co-expression network
sample Sobic006G257100 Sobic006G257100 Sobic009G076800 Sobic009G076800 Sobic006G257100--Sobic009G076800 Sobic001G005000 Sobic001G005000 Sobic006G257100--Sobic001G005000 Sobic006G166700 Sobic006G166700 Sobic006G257100--Sobic006G166700 Sobic002G339400 Sobic002G339400 Sobic006G257100--Sobic002G339400 Sobic010G014300 Sobic010G014300 Sobic006G257100--Sobic010G014300 Sobic007G133600 Sobic007G133600 Sobic006G257100--Sobic007G133600 Sobic001G239400 Sobic001G239400 Sobic006G257100--Sobic001G239400 Sobic002G005400 Sobic002G005400 Sobic006G257100--Sobic002G005400 Sobic004G288400 Sobic004G288400 Sobic006G257100--Sobic004G288400 Sobic009G076800--Sobic001G005000 Sobic010G194500 Sobic010G194500 Sobic009G076800--Sobic010G194500 Sobic002G005200 Sobic002G005200 Sobic009G076800--Sobic002G005200 Sobic006G018900 Sobic006G018900 Sobic009G076800--Sobic006G018900 Sobic009G076800--Sobic006G257100 Sobic009G076800--Sobic006G166700 Sobic004G249700 Sobic004G249700 Sobic009G076800--Sobic004G249700 Sobic009G076800--Sobic001G239400 Sobic009G076800--Sobic010G014300 Sobic001G005000--Sobic010G194500 Sobic001G005000--Sobic009G076800 Sobic001G005000--Sobic006G166700 Sobic001G005000--Sobic001G239400 Sobic001G005000--Sobic006G018900 Sobic001G005000--Sobic004G249700 Sobic001G005000--Sobic010G014300 Sobic001G005000--Sobic007G133600 Sobic001G462100 Sobic001G462100 Sobic001G005000--Sobic001G462100 Sobic006G166700--Sobic010G014300 Sobic006G166700--Sobic001G005000 Sobic010G087200 Sobic010G087200 Sobic006G166700--Sobic010G087200 Sobic002G001300 Sobic002G001300 Sobic006G166700--Sobic002G001300 Sobic006G166700--Sobic004G288400 Sobic006G166700--Sobic001G239400 Sobic010G259200 Sobic010G259200 Sobic006G166700--Sobic010G259200 Sobic006G166700--Sobic010G194500 Sobic006G166700--Sobic009G076800 Sobic002G366700 Sobic002G366700 Sobic002G339400--Sobic002G366700 Sobic001G494150 Sobic001G494150 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic001G428700 Sobic001G428700 Sobic002G339400--Sobic001G428700 Sobic002G339400--Sobic004G288400 Sobic002G339400--Sobic010G014300 Sobic006G075700 Sobic006G075700 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200 Sobic010G014300--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic010G014300--Sobic010G119600 Sobic010G014300--Sobic010G087200 Sobic010G014300--Sobic006G166700 Sobic007G206700 Sobic007G206700 Sobic010G014300--Sobic007G206700 Sobic010G014300--Sobic002G001300 Sobic001G062700 Sobic001G062700 Sobic010G014300--Sobic001G062700 Sobic007G092300 Sobic007G092300 Sobic010G014300--Sobic007G092300 Sobic010G014300--Sobic001G005000 Sobic009G008300 Sobic009G008300 Sobic007G133600--Sobic009G008300 Sobic002G245900 Sobic002G245900 Sobic007G133600--Sobic002G245900 Sobic007G133600--Sobic001G239400 Sobic007G133600--Sobic001G005000 Sobic007G133600--Sobic004G249700 Sobic007G133600--Sobic006G166700 Sobic007G133600--Sobic004G288400 Sobic003G057600 Sobic003G057600 Sobic007G133600--Sobic003G057600 Sobic007G133600--Sobic010G087200 Sobic001G239400--Sobic001G005000 Sobic001G239400--Sobic007G133600 Sobic001G239400--Sobic004G249700 Sobic001G239400--Sobic006G166700 Sobic001G239400--Sobic004G288400 Sobic001G239400--Sobic009G008300 Sobic001G239400--Sobic009G076800 Sobic001G239400--Sobic010G194500 Sobic006G003000 Sobic006G003000 Sobic001G239400--Sobic006G003000 Sobic002G005400--Sobic003G057600 Sobic003G057366 Sobic003G057366 Sobic002G005400--Sobic003G057366 Sobic002G005400--Sobic006G257100 Sobic009G123000 Sobic009G123000 Sobic002G005400--Sobic009G123000 Sobic007G172300 Sobic007G172300 Sobic002G005400--Sobic007G172300 Sobic003G395500 Sobic003G395500 Sobic002G005400--Sobic003G395500 Sobic002G050400 Sobic002G050400 Sobic002G005400--Sobic002G050400 Sobic002G005400--Sobic006G166700 Sobic004G099500 Sobic004G099500 Sobic002G005400--Sobic004G099500 Sobic004G288400--Sobic006G166700 Sobic004G288400--Sobic010G014300 Sobic005G198300 Sobic005G198300 Sobic004G288400--Sobic005G198300 Sobic004G288400--Sobic001G239400 Sobic004G288400--Sobic002G339400 Sobic004G288400--Sobic010G087200 Sobic004G288400--Sobic001G428700 Sobic004G288400--Sobic007G133600 Sobic004G288400--Sobic001G005000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.