Gene annotation
Transcriptome id Sobic.001G494150.1
Synonym -
Functional annotation -
UniProt A0A1Z5SB78
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40350 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g06920.1 : DRD1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G075700 expressed protein -
2 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
4 Sobic.009G236500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.002G366700 expressed protein -
7 Sobic.010G002850 - -
8 Sobic.010G087200 expressed protein -
9 Sobic.005G156700 laccase precursor protein, putative, expressed -
10 Sobic.001G104400 expressed protein -
11 Sobic.005G209800 nodulin, putative, expressed -
12 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
13 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.004G089700 - -
15 Sobic.002G048250 - -
16 Sobic.004G226300 expressed protein -
17 Sobic.009G005800 formin-like protein 6 precursor, putative, expressed -
18 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
19 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
20 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G494150 Sobic001G494150 Sobic006G075700 Sobic006G075700 Sobic001G494150--Sobic006G075700 Sobic010G259200 Sobic010G259200 Sobic001G494150--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic002G001300 Sobic002G001300 Sobic001G494150--Sobic002G001300 Sobic002G366700 Sobic002G366700 Sobic001G494150--Sobic002G366700 Sobic010G002850 Sobic010G002850 Sobic001G494150--Sobic010G002850 Sobic010G087200 Sobic010G087200 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic006G075700--Sobic001G494150 Sobic006G075700--Sobic005G156700 Sobic006G075700--Sobic010G002850 Sobic002G003100 Sobic002G003100 Sobic006G075700--Sobic002G003100 Sobic005G209800 Sobic005G209800 Sobic006G075700--Sobic005G209800 Sobic004G089700 Sobic004G089700 Sobic006G075700--Sobic004G089700 Sobic002G048250 Sobic002G048250 Sobic006G075700--Sobic002G048250 Sobic007G183000 Sobic007G183000 Sobic006G075700--Sobic007G183000 Sobic006G171000 Sobic006G171000 Sobic006G075700--Sobic006G171000 Sobic007G206700 Sobic007G206700 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic003G083700 Sobic003G083700 Sobic010G259200--Sobic003G083700 Sobic001G402701 Sobic001G402701 Sobic010G259200--Sobic001G402701 Sobic003G104900 Sobic003G104900 Sobic010G259200--Sobic003G104900 Sobic003G390300 Sobic003G390300 Sobic010G259200--Sobic003G390300 Sobic010G259200--Sobic010G002850 Sobic010G014300 Sobic010G014300 Sobic010G259200--Sobic010G014300 Sobic010G119600--Sobic010G259200 Sobic001G483700 Sobic001G483700 Sobic010G119600--Sobic001G483700 Sobic010G119600--Sobic003G390300 Sobic001G137200 Sobic001G137200 Sobic010G119600--Sobic001G137200 Sobic010G119600--Sobic010G002850 Sobic010G119600--Sobic007G206700 Sobic010G119600--Sobic003G104900 Sobic001G062700 Sobic001G062700 Sobic010G119600--Sobic001G062700 Sobic010G119600--Sobic003G083700 Sobic003G337700 Sobic003G337700 Sobic009G236500--Sobic003G337700 Sobic004G224300 Sobic004G224300 Sobic009G236500--Sobic004G224300 Sobic009G236500--Sobic004G089700 Sobic002G339250 Sobic002G339250 Sobic009G236500--Sobic002G339250 Sobic009G236500--Sobic005G209800 Sobic001G457100 Sobic001G457100 Sobic009G236500--Sobic001G457100 Sobic009G236500--Sobic010G002850 Sobic009G236500--Sobic002G048250 Sobic004G226300 Sobic004G226300 Sobic009G236500--Sobic004G226300 Sobic002G001300--Sobic010G259200 Sobic002G001300--Sobic007G206700 Sobic002G001300--Sobic003G083700 Sobic002G001300--Sobic010G087200 Sobic002G001300--Sobic010G119600 Sobic002G001300--Sobic001G402701 Sobic002G001300--Sobic001G494150 Sobic002G001300--Sobic003G104900 Sobic006G166700 Sobic006G166700 Sobic002G001300--Sobic006G166700 Sobic002G366700--Sobic001G494150 Sobic002G339400 Sobic002G339400 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic002G366700--Sobic006G075700 Sobic002G058600 Sobic002G058600 Sobic002G366700--Sobic002G058600 Sobic001G513100 Sobic001G513100 Sobic002G366700--Sobic001G513100 Sobic002G366700--Sobic010G259200 Sobic002G366700--Sobic010G119600 Sobic001G428700 Sobic001G428700 Sobic002G366700--Sobic001G428700 Sobic010G002850--Sobic005G209800 Sobic008G023000 Sobic008G023000 Sobic010G002850--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic010G002850--Sobic008G002100 Sobic010G002850--Sobic004G226300 Sobic001G527400 Sobic001G527400 Sobic010G002850--Sobic001G527400 Sobic010G002850--Sobic007G183000 Sobic010G002850--Sobic006G171000 Sobic010G002850--Sobic005G156700 Sobic005G231800 Sobic005G231800 Sobic010G002850--Sobic005G231800 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic005G156700--Sobic008G002100 Sobic005G156700--Sobic008G023000 Sobic005G156700--Sobic005G209800 Sobic005G156700--Sobic004G226300 Sobic005G156700--Sobic001G527400 Sobic005G156700--Sobic007G183000 Sobic005G156700--Sobic010G002850 Sobic005G156700--Sobic005G231800 Sobic003G173032 Sobic003G173032 Sobic005G156700--Sobic003G173032
Octagon: transcription factors


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