Gene annotation
Transcriptome id Sobic.007G005600.1
Synonym Sb07g000680
Functional annotation expressed protein
UniProt C5YLH1
Pfam PF05078
Panther DB PTHR31621 PTHR31621:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24310 : Protein of unknown function (DUF679)
RAP-DB (Rice) LOC_Os08g01530.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G077620.2 , HORVU7Hr1G077620.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G123000 expressed protein -
2 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
3 Sobic.003G127600 ubiquitin-conjugating enzyme, putative, expressed K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
4 Sobic.001G416800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.008G061000 expressed protein -
7 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
9 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
10 Sobic.002G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
11 Sobic.006G003000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.002G005300 dirigent, putative, expressed -
13 Sobic.009G155500 cytochrome P450, putative, expressed -
14 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
15 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
16 Sobic.003G395500 expressed protein -
17 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
18 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
19 Sobic.008G088860 - -
20 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G005600 Sobic007G005600 Sobic009G123000 Sobic009G123000 Sobic007G005600--Sobic009G123000 Sobic001G416900 Sobic001G416900 Sobic007G005600--Sobic001G416900 Sobic003G127600 Sobic003G127600 Sobic007G005600--Sobic003G127600 Sobic001G416800 Sobic001G416800 Sobic007G005600--Sobic001G416800 Sobic005G198300 Sobic005G198300 Sobic007G005600--Sobic005G198300 Sobic008G061000 Sobic008G061000 Sobic007G005600--Sobic008G061000 Sobic002G209300 Sobic002G209300 Sobic007G005600--Sobic002G209300 Sobic004G259700 Sobic004G259700 Sobic007G005600--Sobic004G259700 Sobic007G172300 Sobic007G172300 Sobic007G005600--Sobic007G172300 Sobic009G123000--Sobic003G127600 Sobic009G123000--Sobic001G416800 Sobic009G123000--Sobic005G198300 Sobic006G003000 Sobic006G003000 Sobic009G123000--Sobic006G003000 Sobic009G123000--Sobic001G416900 Sobic001G148600 Sobic001G148600 Sobic009G123000--Sobic001G148600 Sobic009G123000--Sobic008G061000 Sobic009G155500 Sobic009G155500 Sobic009G123000--Sobic009G155500 Sobic010G161300 Sobic010G161300 Sobic009G123000--Sobic010G161300 Sobic001G416900--Sobic001G416800 Sobic001G416900--Sobic003G127600 Sobic001G417000 Sobic001G417000 Sobic001G416900--Sobic001G417000 Sobic002G059200 Sobic002G059200 Sobic001G416900--Sobic002G059200 Sobic001G416900--Sobic009G123000 Sobic001G416900--Sobic002G209300 Sobic002G403400 Sobic002G403400 Sobic001G416900--Sobic002G403400 Sobic002G056300 Sobic002G056300 Sobic001G416900--Sobic002G056300 Sobic003G300701 Sobic003G300701 Sobic001G416900--Sobic003G300701 Sobic003G127600--Sobic001G416800 Sobic003G127600--Sobic009G123000 Sobic003G127600--Sobic001G416900 Sobic003G127600--Sobic002G056300 Sobic003G127600--Sobic002G059200 Sobic004G227000 Sobic004G227000 Sobic003G127600--Sobic004G227000 Sobic003G127600--Sobic008G061000 Sobic004G128600 Sobic004G128600 Sobic003G127600--Sobic004G128600 Sobic003G127600--Sobic002G403400 Sobic001G416800--Sobic003G127600 Sobic001G416800--Sobic001G416900 Sobic001G416800--Sobic002G056300 Sobic001G416800--Sobic002G059200 Sobic001G416800--Sobic002G403400 Sobic001G416800--Sobic009G123000 Sobic003G350100 Sobic003G350100 Sobic001G416800--Sobic003G350100 Sobic001G416800--Sobic008G061000 Sobic001G416800--Sobic004G227000 Sobic005G198300--Sobic009G123000 Sobic005G198300--Sobic006G003000 Sobic004G288400 Sobic004G288400 Sobic005G198300--Sobic004G288400 Sobic005G198300--Sobic003G127600 Sobic006G166700 Sobic006G166700 Sobic005G198300--Sobic006G166700 Sobic005G198300--Sobic001G148600 Sobic010G014300 Sobic010G014300 Sobic005G198300--Sobic010G014300 Sobic005G198300--Sobic001G416800 Sobic010G087200 Sobic010G087200 Sobic005G198300--Sobic010G087200 Sobic001G200500 Sobic001G200500 Sobic008G061000--Sobic001G200500 Sobic004G329100 Sobic004G329100 Sobic008G061000--Sobic004G329100 Sobic008G061000--Sobic004G128600 Sobic006G197000 Sobic006G197000 Sobic008G061000--Sobic006G197000 Sobic008G133100 Sobic008G133100 Sobic008G061000--Sobic008G133100 Sobic001G541900 Sobic001G541900 Sobic008G061000--Sobic001G541900 Sobic001G193400 Sobic001G193400 Sobic008G061000--Sobic001G193400 Sobic007G001300 Sobic007G001300 Sobic008G061000--Sobic007G001300 Sobic008G061000--Sobic003G350100 Sobic001G158000 Sobic001G158000 Sobic002G209300--Sobic001G158000 Sobic002G209300--Sobic002G403400 Sobic002G209300--Sobic001G193400 Sobic002G209300--Sobic002G059200 Sobic004G265400 Sobic004G265400 Sobic002G209300--Sobic004G265400 Sobic002G209300--Sobic003G350100 Sobic007G221800 Sobic007G221800 Sobic002G209300--Sobic007G221800 Sobic004G230900 Sobic004G230900 Sobic002G209300--Sobic004G230900 Sobic007G149600 Sobic007G149600 Sobic002G209300--Sobic007G149600 Sobic004G259700--Sobic001G416900 Sobic009G167500 Sobic009G167500 Sobic004G259700--Sobic009G167500 Sobic004G259700--Sobic009G123000 Sobic004G099500 Sobic004G099500 Sobic004G259700--Sobic004G099500 Sobic004G259700--Sobic001G416800 Sobic004G259700--Sobic003G127600 Sobic004G259700--Sobic007G172300 Sobic003G057366 Sobic003G057366 Sobic004G259700--Sobic003G057366 Sobic007G168400 Sobic007G168400 Sobic004G259700--Sobic007G168400 Sobic003G395500 Sobic003G395500 Sobic007G172300--Sobic003G395500 Sobic009G015000 Sobic009G015000 Sobic007G172300--Sobic009G015000 Sobic003G187100 Sobic003G187100 Sobic007G172300--Sobic003G187100 Sobic007G172300--Sobic003G057366 Sobic004G128000 Sobic004G128000 Sobic007G172300--Sobic004G128000 Sobic007G172300--Sobic004G259700 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic007G172300--Sobic001G416800
Octagon: transcription factors


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