Gene annotation
Transcriptome id Sobic.002G209300.1
Synonym AtMYB36, Sb02g025350, MYB36
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5XD13
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF505
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57620 : myb domain protein 36
RAP-DB (Rice) LOC_Os09g26170.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a056272 , Zm00025a049626 , Zm00025a028009 , Zm00025a038844 , Zm00025a042466 , Zm00025a030884 , Zm00025a047090 , Zm00025a025444 , Zm00025a004957 , Zm00025a013941 , Zm00025a008353 , Zm00025a010442 , Zm00025a004179 , Zm00025a023288 , Zm00025a005685
Brachypodium KQK03128 , KQK05100 , KQK09372 , KQK05002 , KQJ83761 , PNT70109 , KQK09222 , KQK00512 , KQJ90325
Barley HORVU4Hr1G082610.1 , HORVU4Hr1G082610.4 , HORVU3Hr1G019590.1 , HORVU3Hr1G019590.3 , HORVU3Hr1G019590.2 , HORVU2Hr1G081720.2 , HORVU2Hr1G081720.3 , HORVU2Hr1G081720.1 , HORVU2Hr1G081730.1 , HORVU3Hr1G068550.1 , HORVU3Hr1G100500.2 , HORVU3Hr1G100500.1 , HORVU7Hr1G034630.1 , HORVU7Hr1G034630.2 , HORVU5Hr1G063410.3 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU4Hr1G087730.1
Wheat TraesCS7D02G166500 , TraesCS3B02G320800 , TraesCS6A02G344700 , TraesCS4B02G366600 , TraesCS5A02G534400 , TraesCS1A02G406600 , TraesCS3A02G254500 , TraesCS3A02G254500 , TraesCS7A02G165700 , TraesCS5D02G225800 , TraesCS3D02G109800 , TraesCS2B02G387000 , TraesCS3B02G286500 , TraesCS2A02G331200 , TraesCS3B02G515900 , TraesCS5A02G217900 , TraesCS3D02G286300 , TraesCS2D02G331700 , TraesCS4D02G360600 , TraesCS3D02G468400 , TraesCS3A02G286600 , TraesCS4D02G319700 , TraesCS2B02G351000 , TraesCS2D02G366400 , TraesCS5B02G216900 , TraesCS2A02G370000 , TraesCS3A02G108000 , TraesCS7B02G070400 , TraesCS5A02G495500 , TraesCS3B02G126800 , TraesCS5D02G242200 , TraesCS4B02G323300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
2 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
3 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
4 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
6 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
7 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
8 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
9 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
10 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
11 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
12 Sobic.001G406901 - -
13 Sobic.010G099400 metalloendoproteinase 1 precursor, putative, expressed -
14 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
15 Sobic.003G200501 - K11252: histone H2B
16 Sobic.002G326050 - -
17 Sobic.008G061000 expressed protein -
18 Sobic.007G224600 - -
19 Sobic.002G284901 - -
20 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase


Gene co-expression network
sample Sobic002G209300 Sobic002G209300 Sobic001G158000 Sobic001G158000 Sobic002G209300--Sobic001G158000 Sobic002G403400 Sobic002G403400 Sobic002G209300--Sobic002G403400 Sobic001G193400 Sobic001G193400 Sobic002G209300--Sobic001G193400 Sobic002G059200 Sobic002G059200 Sobic002G209300--Sobic002G059200 Sobic004G265400 Sobic004G265400 Sobic002G209300--Sobic004G265400 Sobic003G350100 Sobic003G350100 Sobic002G209300--Sobic003G350100 Sobic007G221800 Sobic007G221800 Sobic002G209300--Sobic007G221800 Sobic004G230900 Sobic004G230900 Sobic002G209300--Sobic004G230900 Sobic007G149600 Sobic007G149600 Sobic002G209300--Sobic007G149600 Sobic001G158000--Sobic007G221800 Sobic002G326050 Sobic002G326050 Sobic001G158000--Sobic002G326050 Sobic001G158000--Sobic004G265400 Sobic001G519300 Sobic001G519300 Sobic001G158000--Sobic001G519300 Sobic007G224600 Sobic007G224600 Sobic001G158000--Sobic007G224600 Sobic001G158000--Sobic007G149600 Sobic003G067500 Sobic003G067500 Sobic001G158000--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic001G158000--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic001G158000--Sobic002G210200 Sobic002G403400--Sobic003G350100 Sobic002G403400--Sobic002G059200 Sobic002G403400--Sobic004G265400 Sobic003G067300 Sobic003G067300 Sobic002G403400--Sobic003G067300 Sobic002G403400--Sobic007G149600 Sobic002G403400--Sobic001G193400 Sobic002G403400--Sobic003G067500 Sobic002G403400--Sobic007G221800 Sobic002G403400--Sobic003G200501 Sobic001G193400--Sobic003G350100 Sobic001G193400--Sobic003G067300 Sobic001G193400--Sobic004G265400 Sobic001G193400--Sobic007G149600 Sobic001G193400--Sobic003G200501 Sobic001G193400--Sobic003G067500 Sobic001G193400--Sobic002G210200 Sobic002G387100 Sobic002G387100 Sobic001G193400--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G193400--Sobic002G430200 Sobic002G059200--Sobic002G403400 Sobic002G059200--Sobic003G350100 Sobic002G059200--Sobic004G265400 Sobic002G059200--Sobic007G149600 Sobic002G059200--Sobic001G193400 Sobic002G059200--Sobic003G067300 Sobic002G056300 Sobic002G056300 Sobic002G059200--Sobic002G056300 Sobic002G059200--Sobic007G221800 Sobic002G059200--Sobic003G067500 Sobic004G265400--Sobic007G149600 Sobic004G265400--Sobic007G221800 Sobic004G265400--Sobic003G350100 Sobic004G265400--Sobic003G067300 Sobic004G265400--Sobic003G067500 Sobic004G265400--Sobic003G200501 Sobic004G265400--Sobic002G210200 Sobic004G265400--Sobic001G193400 Sobic004G265400--Sobic002G059200 Sobic003G350100--Sobic003G067300 Sobic003G350100--Sobic004G265400 Sobic003G350100--Sobic007G149600 Sobic003G350100--Sobic001G193400 Sobic003G350100--Sobic003G067500 Sobic003G350100--Sobic003G200501 Sobic003G350100--Sobic002G210200 Sobic003G350100--Sobic002G387100 Sobic008G133100 Sobic008G133100 Sobic003G350100--Sobic008G133100 Sobic007G221800--Sobic007G149600 Sobic007G221800--Sobic003G200501 Sobic007G221800--Sobic002G210200 Sobic007G221800--Sobic004G265400 Sobic007G221800--Sobic003G067500 Sobic002G284901 Sobic002G284901 Sobic007G221800--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic007G221800--Sobic002G320900 Sobic007G221800--Sobic003G067300 Sobic007G093400 Sobic007G093400 Sobic007G221800--Sobic007G093400 Sobic004G230900--Sobic003G350100 Sobic004G230900--Sobic002G403400 Sobic004G230900--Sobic003G067300 Sobic004G230900--Sobic001G193400 Sobic004G230900--Sobic003G067500 Sobic004G230900--Sobic008G133100 Sobic004G230900--Sobic004G265400 Sobic001G200500 Sobic001G200500 Sobic004G230900--Sobic001G200500 Sobic004G230900--Sobic002G056300 Sobic007G149600--Sobic004G265400 Sobic007G149600--Sobic007G221800 Sobic007G149600--Sobic003G067300 Sobic007G149600--Sobic003G200501 Sobic007G149600--Sobic002G210200 Sobic007G149600--Sobic003G350100 Sobic007G149600--Sobic003G067500 Sobic007G149600--Sobic002G284901 Sobic007G149600--Sobic001G193400
Octagon: transcription factors


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