Gene annotation
Transcriptome id Sobic.001G406901.1
Synonym -
Functional annotation -
UniProt A0A1Z5SA17
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01360 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os03g18120.1 : proteins of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028232 , Zm00025a052658
Brachypodium PNT71482 , PNT71481
Barley HORVU1Hr1G059380.2 , HORVU1Hr1G059380.3 , HORVU1Hr1G059380.1 , HORVU1Hr1G059380.6 , HORVU1Hr1G059380.4 , HORVU1Hr1G059380.5
Wheat TraesCS1D02G228100 , TraesCS1A02G226700 , TraesCS1B02G240700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
2 Sobic.004G082151 - -
3 Sobic.003G200501 - K11252: histone H2B
4 Sobic.003G065001 - -
5 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
6 Sobic.007G093400 - -
7 Sobic.003G367401 - -
8 Sobic.002G284901 - -
9 Sobic.001G525000 polygalacturonase, putative, expressed -
10 Sobic.010G074980 - -
11 Sobic.003G427500 cytochrome P450, putative, expressed -
12 Sobic.010G201000 - -
13 Sobic.003G120400 expressed protein -
14 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
15 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
16 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
17 Sobic.003G126400 expressed protein -
18 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
19 Sobic.002G387100 X8 domain containing protein, expressed -
20 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2


Gene co-expression network
sample Sobic001G406901 Sobic001G406901 Sobic002G210200 Sobic002G210200 Sobic001G406901--Sobic002G210200 Sobic004G082151 Sobic004G082151 Sobic001G406901--Sobic004G082151 Sobic003G200501 Sobic003G200501 Sobic001G406901--Sobic003G200501 Sobic003G065001 Sobic003G065001 Sobic001G406901--Sobic003G065001 Sobic002G320900 Sobic002G320900 Sobic001G406901--Sobic002G320900 Sobic007G093400 Sobic007G093400 Sobic001G406901--Sobic007G093400 Sobic003G367401 Sobic003G367401 Sobic001G406901--Sobic003G367401 Sobic002G284901 Sobic002G284901 Sobic001G406901--Sobic002G284901 Sobic001G525000 Sobic001G525000 Sobic001G406901--Sobic001G525000 Sobic002G210200--Sobic003G200501 Sobic003G067500 Sobic003G067500 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic003G120400 Sobic003G120400 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic003G067300 Sobic003G067300 Sobic002G210200--Sobic003G067300 Sobic007G221800 Sobic007G221800 Sobic002G210200--Sobic007G221800 Sobic010G074980 Sobic010G074980 Sobic004G082151--Sobic010G074980 Sobic003G427500 Sobic003G427500 Sobic004G082151--Sobic003G427500 Sobic010G201000 Sobic010G201000 Sobic004G082151--Sobic010G201000 Sobic004G082151--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic004G082151--Sobic006G065700 Sobic004G082151--Sobic001G525000 Sobic004G082151--Sobic003G120400 Sobic004G082151--Sobic002G210200 Sobic004G082151--Sobic002G320900 Sobic003G200501--Sobic002G210200 Sobic003G200501--Sobic003G067500 Sobic003G200501--Sobic002G284901 Sobic003G200501--Sobic002G320900 Sobic003G200501--Sobic003G120400 Sobic003G200501--Sobic001G525000 Sobic003G200501--Sobic003G067300 Sobic003G200501--Sobic007G221800 Sobic003G200501--Sobic007G093400 Sobic003G065001--Sobic007G093400 Sobic003G065001--Sobic003G367401 Sobic003G065001--Sobic010G201000 Sobic003G065001--Sobic002G320900 Sobic003G065001--Sobic002G210200 Sobic003G065001--Sobic001G525000 Sobic003G065001--Sobic003G200501 Sobic003G065001--Sobic003G120400 Sobic003G065001--Sobic010G074980 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic002G320900--Sobic003G367401 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic007G093400--Sobic010G074980 Sobic002G430200 Sobic002G430200 Sobic003G367401--Sobic002G430200 Sobic003G367401--Sobic010G201000 Sobic003G367401--Sobic001G525000 Sobic002G387100 Sobic002G387100 Sobic003G367401--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic003G367401--Sobic007G122300 Sobic003G367401--Sobic007G093400 Sobic004G239000 Sobic004G239000 Sobic003G367401--Sobic004G239000 Sobic001G016900 Sobic001G016900 Sobic003G367401--Sobic001G016900 Sobic003G367401--Sobic003G120400 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic001G525000--Sobic003G120400 Sobic001G525000--Sobic002G320900 Sobic001G525000--Sobic002G430200 Sobic001G525000--Sobic002G284901 Sobic001G525000--Sobic003G367401 Sobic001G525000--Sobic002G387100 Sobic001G525000--Sobic002G210200 Sobic001G525000--Sobic003G200501 Sobic001G525000--Sobic007G093400
Octagon: transcription factors


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