Gene annotation
Transcriptome id Sobic.002G320900.2,Sobic.002G320900.1
Synonym Sb02g034920
Functional annotation patatin-like phospholipase family protein, expressed
UniProt A0A1B6QEL3 , A0A1W0W6I1
Pfam PF00514 PF13855 PF01734
Panther DB PTHR24185 PTHR24185:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G61850 : phospholipases;galactolipases
RAP-DB (Rice) LOC_Os07g33670.1 : patatin-like phospholipase family protein, expressed
MaizeGDB (Corn) Zm00025a042191 , Zm00025a014804 , Zm00025a029237 , Zm00025a048235
Brachypodium KQK15971
Barley -
Wheat TraesCS2D02G226600 , TraesCS2D02G226600 , TraesCS2D02G226600 , TraesCS2D02G226600 , TraesCS2D02G226600 , TraesCS2B02G246500 , TraesCS2B02G246500 , TraesCS2B02G246500 , TraesCS2B02G246500 , TraesCS2B02G246500 , TraesCS2B02G246500 , TraesCS2B02G246500 , TraesCS2A02G220900 , TraesCS2A02G220900 , TraesCS2A02G220900 , TraesCS2A02G220900 , TraesCS2A02G220900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G284901 - -
2 Sobic.001G525000 polygalacturonase, putative, expressed -
3 Sobic.003G120400 expressed protein -
4 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
5 Sobic.003G200501 - K11252: histone H2B
6 Sobic.007G093400 - -
7 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
8 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
9 Sobic.003G367401 - -
10 Sobic.001G130900 expressed protein -
11 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
12 Sobic.003G065001 - -
13 Sobic.010G201000 - -
14 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
15 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
16 Sobic.010G074980 - -
17 Sobic.002G387100 X8 domain containing protein, expressed -
18 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
19 Sobic.007G224600 - -
20 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B


Gene co-expression network
sample Sobic002G320900 Sobic002G320900 Sobic002G284901 Sobic002G284901 Sobic002G320900--Sobic002G284901 Sobic001G525000 Sobic001G525000 Sobic002G320900--Sobic001G525000 Sobic003G120400 Sobic003G120400 Sobic002G320900--Sobic003G120400 Sobic002G210200 Sobic002G210200 Sobic002G320900--Sobic002G210200 Sobic003G200501 Sobic003G200501 Sobic002G320900--Sobic003G200501 Sobic007G093400 Sobic007G093400 Sobic002G320900--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G320900--Sobic003G367401 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G430200 Sobic002G430200 Sobic002G284901--Sobic002G430200 Sobic001G525000--Sobic003G120400 Sobic001G525000--Sobic002G320900 Sobic001G525000--Sobic002G430200 Sobic001G525000--Sobic002G284901 Sobic001G525000--Sobic003G367401 Sobic002G387100 Sobic002G387100 Sobic001G525000--Sobic002G387100 Sobic001G525000--Sobic002G210200 Sobic001G525000--Sobic003G200501 Sobic001G525000--Sobic007G093400 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic003G120400--Sobic001G130900 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic002G210200--Sobic003G200501 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic003G067300 Sobic003G067300 Sobic002G210200--Sobic003G067300 Sobic007G221800 Sobic007G221800 Sobic002G210200--Sobic007G221800 Sobic003G200501--Sobic002G210200 Sobic003G200501--Sobic003G067500 Sobic003G200501--Sobic002G284901 Sobic003G200501--Sobic002G320900 Sobic003G200501--Sobic003G120400 Sobic003G200501--Sobic001G525000 Sobic003G200501--Sobic003G067300 Sobic003G200501--Sobic007G221800 Sobic003G200501--Sobic007G093400 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic010G201000 Sobic010G201000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic003G065001 Sobic003G065001 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic010G074980 Sobic010G074980 Sobic007G093400--Sobic010G074980 Sobic006G065700--Sobic002G320900 Sobic006G065700--Sobic002G284901 Sobic006G065700--Sobic007G093400 Sobic006G065700--Sobic002G210200 Sobic006G065700--Sobic003G200501 Sobic006G065700--Sobic003G120400 Sobic006G065700--Sobic001G525000 Sobic006G065700--Sobic010G074980 Sobic003G427500 Sobic003G427500 Sobic006G065700--Sobic003G427500 Sobic001G460800--Sobic001G525000 Sobic003G167825 Sobic003G167825 Sobic001G460800--Sobic003G167825 Sobic002G004100 Sobic002G004100 Sobic001G460800--Sobic002G004100 Sobic001G460800--Sobic002G320900 Sobic001G460800--Sobic003G120400 Sobic001G460800--Sobic007G093400 Sobic009G085600 Sobic009G085600 Sobic001G460800--Sobic009G085600 Sobic001G460800--Sobic002G284901 Sobic001G016900 Sobic001G016900 Sobic001G460800--Sobic001G016900 Sobic003G367401--Sobic002G430200 Sobic003G367401--Sobic010G201000 Sobic003G367401--Sobic001G525000 Sobic003G367401--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic003G367401--Sobic007G122300 Sobic003G367401--Sobic007G093400 Sobic004G239000 Sobic004G239000 Sobic003G367401--Sobic004G239000 Sobic003G367401--Sobic001G016900 Sobic003G367401--Sobic003G120400
Octagon: transcription factors


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