Gene annotation
Transcriptome id Sobic.001G460800.1
Synonym Sb01g043240
Functional annotation nucleotidyltransferase, putative, expressed
UniProt C5WTN8
Pfam PF01909
Panther DB PTHR23092 PTHR23092:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016779; nucleotidyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G61690 : nucleotidyltransferases
RAP-DB (Rice) LOC_Os03g11240.1 : nucleotidyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a053109 , Zm00025a003399 , Zm00025a001076
Brachypodium KQK22975 , KQK22976 , PNT77929 , PNT77928
Barley HORVU4Hr1G069060.5 , HORVU4Hr1G069060.4 , HORVU4Hr1G069060.7 , HORVU4Hr1G069060.6 , HORVU4Hr1G069060.1 , HORVU4Hr1G069060.3 , HORVU4Hr1G069060.2
Wheat TraesCS4A02G052700 , TraesCS4A02G052700 , TraesCS4D02G252000 , TraesCS4D02G252000 , TraesCS4B02G251600 , TraesCS4B02G251600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525000 polygalacturonase, putative, expressed -
2 Sobic.003G167825 - -
3 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
4 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
5 Sobic.003G120400 expressed protein -
6 Sobic.007G093400 - -
7 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.002G284901 - -
9 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
10 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.003G367401 - -
12 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
14 Sobic.010G136601 - -
15 Sobic.010G201000 - -
16 Sobic.003G200501 - K11252: histone H2B
17 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
18 Sobic.010G074980 - -
19 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
20 Sobic.002G387100 X8 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G460800 Sobic001G460800 Sobic001G525000 Sobic001G525000 Sobic001G460800--Sobic001G525000 Sobic003G167825 Sobic003G167825 Sobic001G460800--Sobic003G167825 Sobic002G004100 Sobic002G004100 Sobic001G460800--Sobic002G004100 Sobic002G320900 Sobic002G320900 Sobic001G460800--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic001G460800--Sobic003G120400 Sobic007G093400 Sobic007G093400 Sobic001G460800--Sobic007G093400 Sobic009G085600 Sobic009G085600 Sobic001G460800--Sobic009G085600 Sobic002G284901 Sobic002G284901 Sobic001G460800--Sobic002G284901 Sobic001G016900 Sobic001G016900 Sobic001G460800--Sobic001G016900 Sobic001G525000--Sobic003G120400 Sobic001G525000--Sobic002G320900 Sobic002G430200 Sobic002G430200 Sobic001G525000--Sobic002G430200 Sobic001G525000--Sobic002G284901 Sobic003G367401 Sobic003G367401 Sobic001G525000--Sobic003G367401 Sobic002G387100 Sobic002G387100 Sobic001G525000--Sobic002G387100 Sobic002G210200 Sobic002G210200 Sobic001G525000--Sobic002G210200 Sobic003G200501 Sobic003G200501 Sobic001G525000--Sobic003G200501 Sobic001G525000--Sobic007G093400 Sobic003G167825--Sobic009G085600 Sobic003G167825--Sobic001G460800 Sobic003G167825--Sobic002G004100 Sobic004G016600 Sobic004G016600 Sobic003G167825--Sobic004G016600 Sobic008G119000 Sobic008G119000 Sobic003G167825--Sobic008G119000 Sobic003G038300 Sobic003G038300 Sobic003G167825--Sobic003G038300 Sobic003G167825--Sobic001G016900 Sobic002G285800 Sobic002G285800 Sobic003G167825--Sobic002G285800 Sobic003G126400 Sobic003G126400 Sobic003G167825--Sobic003G126400 Sobic002G004100--Sobic001G016900 Sobic002G004100--Sobic009G085600 Sobic007G111600 Sobic007G111600 Sobic002G004100--Sobic007G111600 Sobic002G004100--Sobic003G167825 Sobic002G004100--Sobic001G460800 Sobic002G004100--Sobic003G367401 Sobic004G239000 Sobic004G239000 Sobic002G004100--Sobic004G239000 Sobic003G099500 Sobic003G099500 Sobic002G004100--Sobic003G099500 Sobic002G004100--Sobic004G016600 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic002G320900--Sobic006G065700 Sobic002G320900--Sobic001G460800 Sobic002G320900--Sobic003G367401 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic003G120400--Sobic001G130900 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic010G201000 Sobic010G201000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic003G065001 Sobic003G065001 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic010G074980 Sobic010G074980 Sobic007G093400--Sobic010G074980 Sobic009G085600--Sobic003G167825 Sobic009G085600--Sobic008G119000 Sobic009G085600--Sobic002G004100 Sobic009G085600--Sobic004G016600 Sobic007G116600 Sobic007G116600 Sobic009G085600--Sobic007G116600 Sobic006G180500 Sobic006G180500 Sobic009G085600--Sobic006G180500 Sobic009G085600--Sobic007G111600 Sobic007G204500 Sobic007G204500 Sobic009G085600--Sobic007G204500 Sobic009G085600--Sobic001G016900 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic001G016900--Sobic004G239000 Sobic001G016900--Sobic003G099500 Sobic001G016900--Sobic003G367401 Sobic001G016900--Sobic007G111600 Sobic008G131800 Sobic008G131800 Sobic001G016900--Sobic008G131800 Sobic001G016900--Sobic002G430200 Sobic001G016900--Sobic010G201000 Sobic001G016900--Sobic002G004100 Sobic001G016900--Sobic004G016600
Octagon: transcription factors


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