Gene annotation
Transcriptome id Sobic.003G167825.1,Sobic.003G167825.2
Synonym -
Functional annotation -
UniProt A0A1W0VXM1
Pfam PF04783
Panther DB PTHR21450 PTHR21450:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17110 : Protein of unknown function (DUF630 and DUF632)
RAP-DB (Rice) LOC_Os09g37520.1 : DUF630/DUF632 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a014502
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -
2 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
3 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
4 Sobic.004G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.008G119000 cysteine protease, putative, expressed -
6 Sobic.003G038300 - -
7 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
8 Sobic.002G285800 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR52 - Auxin-responsive SAUR gene family member, expressed -
9 Sobic.003G126400 expressed protein -
10 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
11 Sobic.003G427500 cytochrome P450, putative, expressed -
12 Sobic.010G201000 - -
13 Sobic.010G074980 - -
14 Sobic.007G013100 OsFBX142 - F-box domain containing protein, expressed -
15 Sobic.001G525000 polygalacturonase, putative, expressed -
16 Sobic.007G093400 - -
17 Sobic.007G111600 WRKY89, expressed -
18 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
19 Sobic.006G180500 - -
20 Sobic.003G367401 - -


Gene co-expression network
sample Sobic003G167825 Sobic003G167825 Sobic009G085600 Sobic009G085600 Sobic003G167825--Sobic009G085600 Sobic001G460800 Sobic001G460800 Sobic003G167825--Sobic001G460800 Sobic002G004100 Sobic002G004100 Sobic003G167825--Sobic002G004100 Sobic004G016600 Sobic004G016600 Sobic003G167825--Sobic004G016600 Sobic008G119000 Sobic008G119000 Sobic003G167825--Sobic008G119000 Sobic003G038300 Sobic003G038300 Sobic003G167825--Sobic003G038300 Sobic001G016900 Sobic001G016900 Sobic003G167825--Sobic001G016900 Sobic002G285800 Sobic002G285800 Sobic003G167825--Sobic002G285800 Sobic003G126400 Sobic003G126400 Sobic003G167825--Sobic003G126400 Sobic009G085600--Sobic003G167825 Sobic009G085600--Sobic008G119000 Sobic009G085600--Sobic002G004100 Sobic009G085600--Sobic004G016600 Sobic007G116600 Sobic007G116600 Sobic009G085600--Sobic007G116600 Sobic006G180500 Sobic006G180500 Sobic009G085600--Sobic006G180500 Sobic007G111600 Sobic007G111600 Sobic009G085600--Sobic007G111600 Sobic007G204500 Sobic007G204500 Sobic009G085600--Sobic007G204500 Sobic009G085600--Sobic001G016900 Sobic001G525000 Sobic001G525000 Sobic001G460800--Sobic001G525000 Sobic001G460800--Sobic003G167825 Sobic001G460800--Sobic002G004100 Sobic002G320900 Sobic002G320900 Sobic001G460800--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic001G460800--Sobic003G120400 Sobic007G093400 Sobic007G093400 Sobic001G460800--Sobic007G093400 Sobic001G460800--Sobic009G085600 Sobic002G284901 Sobic002G284901 Sobic001G460800--Sobic002G284901 Sobic001G460800--Sobic001G016900 Sobic002G004100--Sobic001G016900 Sobic002G004100--Sobic009G085600 Sobic002G004100--Sobic007G111600 Sobic002G004100--Sobic003G167825 Sobic002G004100--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G004100--Sobic003G367401 Sobic004G239000 Sobic004G239000 Sobic002G004100--Sobic004G239000 Sobic003G099500 Sobic003G099500 Sobic002G004100--Sobic003G099500 Sobic002G004100--Sobic004G016600 Sobic001G120100 Sobic001G120100 Sobic004G016600--Sobic001G120100 Sobic004G016600--Sobic001G016900 Sobic004G016600--Sobic009G085600 Sobic004G251350 Sobic004G251350 Sobic004G016600--Sobic004G251350 Sobic001G537900 Sobic001G537900 Sobic004G016600--Sobic001G537900 Sobic007G013100 Sobic007G013100 Sobic004G016600--Sobic007G013100 Sobic004G016600--Sobic003G167825 Sobic004G016600--Sobic007G111600 Sobic009G152901 Sobic009G152901 Sobic004G016600--Sobic009G152901 Sobic008G119000--Sobic009G085600 Sobic008G119000--Sobic006G180500 Sobic008G119000--Sobic007G204500 Sobic008G119000--Sobic004G016600 Sobic008G119000--Sobic003G167825 Sobic008G119000--Sobic007G116600 Sobic006G222800 Sobic006G222800 Sobic008G119000--Sobic006G222800 Sobic009G082400 Sobic009G082400 Sobic008G119000--Sobic009G082400 Sobic008G119000--Sobic004G251350 Sobic003G038300--Sobic003G126400 Sobic003G038300--Sobic003G167825 Sobic003G038300--Sobic009G085600 Sobic006G069050 Sobic006G069050 Sobic003G038300--Sobic006G069050 Sobic001G115900 Sobic001G115900 Sobic003G038300--Sobic001G115900 Sobic003G038300--Sobic004G016600 Sobic010G201000 Sobic010G201000 Sobic003G038300--Sobic010G201000 Sobic003G038300--Sobic001G016900 Sobic004G152501 Sobic004G152501 Sobic003G038300--Sobic004G152501 Sobic001G016900--Sobic004G239000 Sobic001G016900--Sobic003G099500 Sobic001G016900--Sobic003G367401 Sobic001G016900--Sobic007G111600 Sobic008G131800 Sobic008G131800 Sobic001G016900--Sobic008G131800 Sobic002G430200 Sobic002G430200 Sobic001G016900--Sobic002G430200 Sobic001G016900--Sobic010G201000 Sobic001G016900--Sobic002G004100 Sobic001G016900--Sobic004G016600 Sobic010G136601 Sobic010G136601 Sobic002G285800--Sobic010G136601 Sobic002G285800--Sobic003G167825 Sobic002G285800--Sobic001G460800 Sobic003G427500 Sobic003G427500 Sobic002G285800--Sobic003G427500 Sobic001G223400 Sobic001G223400 Sobic002G285800--Sobic001G223400 Sobic002G285800--Sobic009G085600 Sobic004G357033 Sobic004G357033 Sobic002G285800--Sobic004G357033 Sobic006G103601 Sobic006G103601 Sobic002G285800--Sobic006G103601 Sobic009G238200 Sobic009G238200 Sobic002G285800--Sobic009G238200 Sobic003G126400--Sobic006G069050 Sobic003G126400--Sobic001G115900 Sobic003G126400--Sobic003G038300 Sobic003G126400--Sobic003G427500 Sobic003G126400--Sobic003G167825 Sobic003G126400--Sobic010G201000 Sobic003G126400--Sobic007G093400 Sobic003G065001 Sobic003G065001 Sobic003G126400--Sobic003G065001 Sobic003G126400--Sobic004G152501
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.