Gene annotation
Transcriptome id Sobic.002G285800.1
Synonym Sb02g031820, SbSAUR25, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
UniProt C5X718
Pfam PF02519
Panther DB PTHR31175 PTHR31175:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G29500 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37470.1 : OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a014500 , Zm00025a014499 , Zm00025a014498 , Zm00025a014496
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G285800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G136601 - -
2 Sobic.003G167825 - -
3 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
4 Sobic.003G427500 cytochrome P450, putative, expressed -
5 Sobic.001G223400 glucosyltransferase, putative, expressed -
6 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -
7 Sobic.004G357033 - -
8 Sobic.006G103601 - -
9 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
10 Sobic.003G126400 expressed protein -
11 Sobic.007G093400 - -
12 Sobic.010G074980 - -
13 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
14 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
15 Sobic.004G082151 - -
16 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
17 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.009G174600 OsFBX407 - F-box domain containing protein, expressed -
19 Sobic.001G525000 polygalacturonase, putative, expressed -
20 Sobic.003G038300 - -


Gene co-expression network
sample Sobic002G285800 Sobic002G285800 Sobic010G136601 Sobic010G136601 Sobic002G285800--Sobic010G136601 Sobic003G167825 Sobic003G167825 Sobic002G285800--Sobic003G167825 Sobic001G460800 Sobic001G460800 Sobic002G285800--Sobic001G460800 Sobic003G427500 Sobic003G427500 Sobic002G285800--Sobic003G427500 Sobic001G223400 Sobic001G223400 Sobic002G285800--Sobic001G223400 Sobic009G085600 Sobic009G085600 Sobic002G285800--Sobic009G085600 Sobic004G357033 Sobic004G357033 Sobic002G285800--Sobic004G357033 Sobic006G103601 Sobic006G103601 Sobic002G285800--Sobic006G103601 Sobic009G238200 Sobic009G238200 Sobic002G285800--Sobic009G238200 Sobic010G136601--Sobic001G223400 Sobic010G136601--Sobic002G285800 Sobic010G136601--Sobic001G460800 Sobic010G136601--Sobic003G427500 Sobic010G136601--Sobic004G357033 Sobic002G320900 Sobic002G320900 Sobic010G136601--Sobic002G320900 Sobic010G136601--Sobic003G167825 Sobic006G065700 Sobic006G065700 Sobic010G136601--Sobic006G065700 Sobic007G093400 Sobic007G093400 Sobic010G136601--Sobic007G093400 Sobic003G167825--Sobic009G085600 Sobic003G167825--Sobic001G460800 Sobic002G004100 Sobic002G004100 Sobic003G167825--Sobic002G004100 Sobic004G016600 Sobic004G016600 Sobic003G167825--Sobic004G016600 Sobic008G119000 Sobic008G119000 Sobic003G167825--Sobic008G119000 Sobic003G038300 Sobic003G038300 Sobic003G167825--Sobic003G038300 Sobic001G016900 Sobic001G016900 Sobic003G167825--Sobic001G016900 Sobic003G167825--Sobic002G285800 Sobic003G126400 Sobic003G126400 Sobic003G167825--Sobic003G126400 Sobic001G525000 Sobic001G525000 Sobic001G460800--Sobic001G525000 Sobic001G460800--Sobic003G167825 Sobic001G460800--Sobic002G004100 Sobic001G460800--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic001G460800--Sobic003G120400 Sobic001G460800--Sobic007G093400 Sobic001G460800--Sobic009G085600 Sobic002G284901 Sobic002G284901 Sobic001G460800--Sobic002G284901 Sobic001G460800--Sobic001G016900 Sobic010G074980 Sobic010G074980 Sobic003G427500--Sobic010G074980 Sobic003G427500--Sobic003G126400 Sobic003G427500--Sobic006G065700 Sobic003G427500--Sobic007G093400 Sobic004G082151 Sobic004G082151 Sobic003G427500--Sobic004G082151 Sobic010G201000 Sobic010G201000 Sobic003G427500--Sobic010G201000 Sobic003G427500--Sobic003G167825 Sobic003G427500--Sobic002G320900 Sobic003G427500--Sobic003G120400 Sobic001G223400--Sobic010G136601 Sobic001G519300 Sobic001G519300 Sobic001G223400--Sobic001G519300 Sobic001G223400--Sobic006G065700 Sobic001G223400--Sobic002G320900 Sobic001G223400--Sobic001G460800 Sobic001G223400--Sobic002G285800 Sobic001G223400--Sobic004G357033 Sobic001G223400--Sobic003G427500 Sobic001G223400--Sobic002G284901 Sobic009G085600--Sobic003G167825 Sobic009G085600--Sobic008G119000 Sobic009G085600--Sobic002G004100 Sobic009G085600--Sobic004G016600 Sobic007G116600 Sobic007G116600 Sobic009G085600--Sobic007G116600 Sobic006G180500 Sobic006G180500 Sobic009G085600--Sobic006G180500 Sobic007G111600 Sobic007G111600 Sobic009G085600--Sobic007G111600 Sobic007G204500 Sobic007G204500 Sobic009G085600--Sobic007G204500 Sobic009G085600--Sobic001G016900 Sobic004G344301 Sobic004G344301 Sobic004G357033--Sobic004G344301 Sobic001G220200 Sobic001G220200 Sobic004G357033--Sobic001G220200 Sobic004G225450 Sobic004G225450 Sobic004G357033--Sobic004G225450 Sobic004G357066 Sobic004G357066 Sobic004G357033--Sobic004G357066 Sobic001G410800 Sobic001G410800 Sobic004G357033--Sobic001G410800 Sobic004G357033--Sobic010G136601 Sobic004G357033--Sobic001G223400 Sobic010G158766 Sobic010G158766 Sobic004G357033--Sobic010G158766 Sobic004G357033--Sobic002G285800 Sobic006G103601--Sobic009G238200 Sobic006G103601--Sobic002G285800 Sobic010G106400 Sobic010G106400 Sobic006G103601--Sobic010G106400 Sobic002G116300 Sobic002G116300 Sobic006G103601--Sobic002G116300 Sobic006G146400 Sobic006G146400 Sobic006G103601--Sobic006G146400 Sobic009G174600 Sobic009G174600 Sobic006G103601--Sobic009G174600 Sobic001G537600 Sobic001G537600 Sobic006G103601--Sobic001G537600 Sobic003G379500 Sobic003G379500 Sobic006G103601--Sobic003G379500 Sobic009G258150 Sobic009G258150 Sobic006G103601--Sobic009G258150 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic009G238200--Sobic003G167825 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G238200--Sobic009G085600 Sobic009G238200--Sobic003G126400
Octagon: transcription factors


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