Gene annotation
Transcriptome id Sobic.009G238200.1
Synonym Sb09g029050, ATWRKY30, WRKY30, WRKY19
Functional annotation transcription factor (PubMedID : 30367619)
WRKY19, expressed
UniProt C5YVZ9
Pfam PF03106
Panther DB PTHR32096 PTHR32096:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G11070 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os05g49620.1 : WRKY19, expressed
MaizeGDB (Corn) Zm00025a027056 , Zm00025a028194 , Zm00025a039768 , Zm00025a036657 , Zm00025a038706
Brachypodium KQK09011 , KQK09010 , KQJ98088
Barley HORVU2Hr1G029430.1 , HORVU2Hr1G029430.2
Wheat TraesCS2D02G168600 , TraesCS2A02G161500 , TraesCS2B02G187500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G116300 poly synthetase 1, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
2 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
3 Sobic.003G167825 - -
4 Sobic.006G103601 - -
5 Sobic.006G069050 - -
6 Sobic.009G258150 - -
7 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.003G126400 expressed protein -
10 Sobic.010G106400 - -
11 Sobic.004G302400 NAC domain containing protein, putative, expressed -
12 Sobic.001G537600 expressed protein -
13 Sobic.003G038300 - -
14 Sobic.002G285800 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR52 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
16 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
17 Sobic.010G035300 WRKY73, expressed -
18 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.006G037000 - -
20 Sobic.008G119000 cysteine protease, putative, expressed -


Gene co-expression network
sample Sobic009G238200 Sobic009G238200 Sobic002G116300 Sobic002G116300 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic003G167825 Sobic003G167825 Sobic009G238200--Sobic003G167825 Sobic006G103601 Sobic006G103601 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G258150 Sobic009G258150 Sobic009G238200--Sobic009G258150 Sobic006G146400 Sobic006G146400 Sobic009G238200--Sobic006G146400 Sobic009G085600 Sobic009G085600 Sobic009G238200--Sobic009G085600 Sobic003G126400 Sobic003G126400 Sobic009G238200--Sobic003G126400 Sobic010G035300 Sobic010G035300 Sobic002G116300--Sobic010G035300 Sobic004G302400 Sobic004G302400 Sobic002G116300--Sobic004G302400 Sobic006G222650 Sobic006G222650 Sobic002G116300--Sobic006G222650 Sobic002G116300--Sobic009G238200 Sobic002G116300--Sobic006G146400 Sobic008G119000 Sobic008G119000 Sobic002G116300--Sobic008G119000 Sobic006G222800 Sobic006G222800 Sobic002G116300--Sobic006G222800 Sobic002G247100 Sobic002G247100 Sobic002G116300--Sobic002G247100 Sobic009G174600 Sobic009G174600 Sobic002G116300--Sobic009G174600 Sobic001G115900--Sobic003G126400 Sobic003G379500 Sobic003G379500 Sobic001G115900--Sobic003G379500 Sobic003G038300 Sobic003G038300 Sobic001G115900--Sobic003G038300 Sobic001G115900--Sobic006G069050 Sobic003G065001 Sobic003G065001 Sobic001G115900--Sobic003G065001 Sobic001G115900--Sobic009G258150 Sobic001G115900--Sobic003G167825 Sobic001G115900--Sobic009G085600 Sobic003G367401 Sobic003G367401 Sobic001G115900--Sobic003G367401 Sobic003G167825--Sobic009G085600 Sobic001G460800 Sobic001G460800 Sobic003G167825--Sobic001G460800 Sobic002G004100 Sobic002G004100 Sobic003G167825--Sobic002G004100 Sobic004G016600 Sobic004G016600 Sobic003G167825--Sobic004G016600 Sobic003G167825--Sobic008G119000 Sobic003G167825--Sobic003G038300 Sobic001G016900 Sobic001G016900 Sobic003G167825--Sobic001G016900 Sobic002G285800 Sobic002G285800 Sobic003G167825--Sobic002G285800 Sobic003G167825--Sobic003G126400 Sobic006G103601--Sobic009G238200 Sobic006G103601--Sobic002G285800 Sobic010G106400 Sobic010G106400 Sobic006G103601--Sobic010G106400 Sobic006G103601--Sobic002G116300 Sobic006G103601--Sobic006G146400 Sobic006G103601--Sobic009G174600 Sobic001G537600 Sobic001G537600 Sobic006G103601--Sobic001G537600 Sobic006G103601--Sobic003G379500 Sobic006G103601--Sobic009G258150 Sobic006G069050--Sobic003G126400 Sobic006G069050--Sobic003G038300 Sobic004G152501 Sobic004G152501 Sobic006G069050--Sobic004G152501 Sobic006G069050--Sobic001G115900 Sobic006G069050--Sobic003G065001 Sobic006G058300 Sobic006G058300 Sobic006G069050--Sobic006G058300 Sobic010G201000 Sobic010G201000 Sobic006G069050--Sobic010G201000 Sobic006G069050--Sobic003G167825 Sobic010G074980 Sobic010G074980 Sobic006G069050--Sobic010G074980 Sobic009G258150--Sobic003G379500 Sobic009G258150--Sobic001G115900 Sobic009G258150--Sobic003G038300 Sobic009G258150--Sobic009G238200 Sobic009G258150--Sobic006G069050 Sobic009G258150--Sobic003G126400 Sobic009G258150--Sobic004G152501 Sobic010G257300 Sobic010G257300 Sobic009G258150--Sobic010G257300 Sobic010G244701 Sobic010G244701 Sobic009G258150--Sobic010G244701 Sobic006G280900 Sobic006G280900 Sobic006G146400--Sobic006G280900 Sobic006G146400--Sobic006G222650 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic006G146400--Sobic001G537600 Sobic006G146400--Sobic004G302400 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic006G146400--Sobic003G379500 Sobic009G085600--Sobic003G167825 Sobic009G085600--Sobic008G119000 Sobic009G085600--Sobic002G004100 Sobic009G085600--Sobic004G016600 Sobic007G116600 Sobic007G116600 Sobic009G085600--Sobic007G116600 Sobic006G180500 Sobic006G180500 Sobic009G085600--Sobic006G180500 Sobic007G111600 Sobic007G111600 Sobic009G085600--Sobic007G111600 Sobic007G204500 Sobic007G204500 Sobic009G085600--Sobic007G204500 Sobic009G085600--Sobic001G016900 Sobic003G126400--Sobic006G069050 Sobic003G126400--Sobic001G115900 Sobic003G126400--Sobic003G038300 Sobic003G427500 Sobic003G427500 Sobic003G126400--Sobic003G427500 Sobic003G126400--Sobic003G167825 Sobic003G126400--Sobic010G201000 Sobic007G093400 Sobic007G093400 Sobic003G126400--Sobic007G093400 Sobic003G126400--Sobic003G065001 Sobic003G126400--Sobic004G152501
Octagon: transcription factors


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