Gene annotation
Transcriptome id Sobic.002G116300.1
Synonym Sb02g009900, ATPARP2, PARP2
Functional annotation poly synthetase 1, putative, expressed
UniProt A0A1B6QAL7
Pfam PF00533 PF05406 PF08063 PF02877 PF00645 PF00644
Panther DB PTHR10459 PTHR10459:SF60
NCBI CDD KOG1037; NAD+ ADP-ribosyltransferase Parp, required for poly-ADP ribosylation of nuclear proteins
KEGG Orthology K10798; poly [ADP-ribose] polymerase 2/3/4
Gene Ontology GO:0005634; nucleus GO:0003950NAD+ ADP-ribosyltransferase activity GO:0006471protein ADP-ribosylation GO:0008270zinc ion binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G31320 : poly(ADP-ribose) polymerase 2
RAP-DB (Rice) LOC_Os07g23110.1 : poly synthetase 1, putative, expressed
MaizeGDB (Corn) Zm00025a013340
Brachypodium KQK20111 , KQK20110 , KQK20112 , KQK20109
Barley HORVU1Hr1G005980.25 , HORVU1Hr1G005980.9 , HORVU1Hr1G005980.8 , HORVU1Hr1G005980.1 , HORVU1Hr1G005980.3 , HORVU1Hr1G005980.2 , HORVU1Hr1G005980.5 , HORVU1Hr1G005980.4 , HORVU1Hr1G005980.7 , HORVU1Hr1G005980.6 , HORVU1Hr1G005980.20 , HORVU1Hr1G005980.21 , HORVU1Hr1G005980.22 , HORVU1Hr1G005980.23 , HORVU1Hr1G005980.24 , HORVU1Hr1G005980.26 , HORVU1Hr1G005980.27 , HORVU1Hr1G005980.19 , HORVU1Hr1G005980.18 , HORVU1Hr1G005980.15 , HORVU1Hr1G005980.14 , HORVU1Hr1G005980.17 , HORVU1Hr1G005980.16 , HORVU1Hr1G005980.11 , HORVU1Hr1G005980.10 , HORVU1Hr1G005980.13 , HORVU1Hr1G005980.12
Wheat TraesCS1B02G049300 , TraesCS1B02G049300 , TraesCS1B02G049300 , TraesCS1B02G049300 , TraesCS1B02G049300 , TraesCS1D02G040100 , TraesCS1D02G040100 , TraesCS1D02G040100 , TraesCS1A02G038400 , TraesCS1A02G038400
Populus -


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cDNA sequences
Sobic.002G116300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G035300 WRKY73, expressed -
2 Sobic.004G302400 NAC domain containing protein, putative, expressed -
3 Sobic.006G222650 - -
4 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
5 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.008G119000 cysteine protease, putative, expressed -
7 Sobic.006G222800 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.002G247100 expressed protein -
9 Sobic.009G174600 OsFBX407 - F-box domain containing protein, expressed -
10 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.003G167825 - -
12 Sobic.004G314750 - -
13 Sobic.006G103601 - -
14 Sobic.006G162300 expressed protein -
15 Sobic.002G065300 OsSub58 - Putative Subtilisin homologue, expressed -
16 Sobic.008G164525 - -
17 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.006G180500 - -
19 Sobic.005G091400 - -
20 Sobic.002G114600 - -


Gene co-expression network
sample Sobic002G116300 Sobic002G116300 Sobic010G035300 Sobic010G035300 Sobic002G116300--Sobic010G035300 Sobic004G302400 Sobic004G302400 Sobic002G116300--Sobic004G302400 Sobic006G222650 Sobic006G222650 Sobic002G116300--Sobic006G222650 Sobic009G238200 Sobic009G238200 Sobic002G116300--Sobic009G238200 Sobic006G146400 Sobic006G146400 Sobic002G116300--Sobic006G146400 Sobic008G119000 Sobic008G119000 Sobic002G116300--Sobic008G119000 Sobic006G222800 Sobic006G222800 Sobic002G116300--Sobic006G222800 Sobic002G247100 Sobic002G247100 Sobic002G116300--Sobic002G247100 Sobic009G174600 Sobic009G174600 Sobic002G116300--Sobic009G174600 Sobic010G035300--Sobic006G222650 Sobic010G035300--Sobic002G116300 Sobic010G035300--Sobic004G302400 Sobic006G162300 Sobic006G162300 Sobic010G035300--Sobic006G162300 Sobic010G035300--Sobic006G222800 Sobic007G161450 Sobic007G161450 Sobic010G035300--Sobic007G161450 Sobic004G001900 Sobic004G001900 Sobic010G035300--Sobic004G001900 Sobic005G091400 Sobic005G091400 Sobic010G035300--Sobic005G091400 Sobic004G269500 Sobic004G269500 Sobic010G035300--Sobic004G269500 Sobic004G302400--Sobic006G222650 Sobic004G302400--Sobic009G174600 Sobic004G302400--Sobic010G035300 Sobic004G302400--Sobic002G116300 Sobic004G302400--Sobic006G162300 Sobic002G065300 Sobic002G065300 Sobic004G302400--Sobic002G065300 Sobic004G302400--Sobic009G238200 Sobic004G302400--Sobic006G146400 Sobic006G280900 Sobic006G280900 Sobic004G302400--Sobic006G280900 Sobic006G222650--Sobic004G302400 Sobic006G222650--Sobic010G035300 Sobic006G222650--Sobic002G116300 Sobic006G222650--Sobic006G146400 Sobic006G222650--Sobic004G269500 Sobic006G222650--Sobic006G280900 Sobic004G302550 Sobic004G302550 Sobic006G222650--Sobic004G302550 Sobic006G222650--Sobic006G162300 Sobic006G222650--Sobic002G065300 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic003G167825 Sobic003G167825 Sobic009G238200--Sobic003G167825 Sobic006G103601 Sobic006G103601 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G258150 Sobic009G258150 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G085600 Sobic009G085600 Sobic009G238200--Sobic009G085600 Sobic003G126400 Sobic003G126400 Sobic009G238200--Sobic003G126400 Sobic006G146400--Sobic006G280900 Sobic006G146400--Sobic006G222650 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic001G537600 Sobic001G537600 Sobic006G146400--Sobic001G537600 Sobic006G146400--Sobic004G302400 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic003G379500 Sobic003G379500 Sobic006G146400--Sobic003G379500 Sobic008G119000--Sobic009G085600 Sobic006G180500 Sobic006G180500 Sobic008G119000--Sobic006G180500 Sobic007G204500 Sobic007G204500 Sobic008G119000--Sobic007G204500 Sobic004G016600 Sobic004G016600 Sobic008G119000--Sobic004G016600 Sobic008G119000--Sobic003G167825 Sobic007G116600 Sobic007G116600 Sobic008G119000--Sobic007G116600 Sobic008G119000--Sobic006G222800 Sobic009G082400 Sobic009G082400 Sobic008G119000--Sobic009G082400 Sobic004G251350 Sobic004G251350 Sobic008G119000--Sobic004G251350 Sobic006G222800--Sobic006G180500 Sobic002G165401 Sobic002G165401 Sobic006G222800--Sobic002G165401 Sobic006G222800--Sobic008G119000 Sobic006G222800--Sobic007G204500 Sobic006G222800--Sobic007G161450 Sobic006G256801 Sobic006G256801 Sobic006G222800--Sobic006G256801 Sobic006G222800--Sobic004G001900 Sobic006G222800--Sobic009G085600 Sobic003G008850 Sobic003G008850 Sobic006G222800--Sobic003G008850 Sobic002G247100--Sobic002G116300 Sobic002G247100--Sobic008G119000 Sobic002G247100--Sobic006G222800 Sobic002G247100--Sobic010G035300 Sobic002G247100--Sobic006G180500 Sobic002G247100--Sobic009G085600 Sobic002G247100--Sobic004G001900 Sobic002G247100--Sobic003G167825 Sobic002G247100--Sobic006G162300 Sobic009G174600--Sobic004G302400 Sobic009G174600--Sobic002G065300 Sobic009G174600--Sobic002G116300 Sobic009G174600--Sobic006G222650 Sobic001G543600 Sobic001G543600 Sobic009G174600--Sobic001G543600 Sobic002G285800 Sobic002G285800 Sobic009G174600--Sobic002G285800 Sobic009G174600--Sobic006G103601 Sobic009G174600--Sobic010G035300 Sobic009G174600--Sobic009G238200
Octagon: transcription factors


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