Gene annotation
Transcriptome id Sobic.001G537600.2,Sobic.001G537600.3,Sobic.001G537600.1
Synonym Sb01g050030
Functional annotation expressed protein
UniProt C5WMQ0 , A0A1Z5SC18
Pfam -
Panther DB PTHR35500 PTHR35500:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03050 : -
RAP-DB (Rice) LOC_Os03g01840.1 : knotted 1-binding protein 36, putative, expressed
MaizeGDB (Corn) Zm00025a000155
Brachypodium KQK24058 , KQK24059 , PNT78345
Barley HORVU2Hr1G109150.2 , HORVU2Hr1G109150.3 , HORVU2Hr1G109150.6 , HORVU2Hr1G109150.7 , HORVU2Hr1G109150.4 , HORVU2Hr1G109150.5 , HORVU2Hr1G109150.8 , HORVU2Hr1G109150.9 , HORVU2Hr1G109150.10 , HORVU2Hr1G109150.11 , HORVU2Hr1G109150.12 , HORVU2Hr1G109150.13
Wheat TraesCS2A02G488700 , TraesCS2A02G488700 , TraesCS2B02G516500 , TraesCS1A02G060300 , TraesCS2D02G489000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G106400 - -
2 Sobic.001G068901 - -
3 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
5 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.006G065200 SAM domain family protein, expressed -
7 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
8 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
9 Sobic.006G103601 - -
10 Sobic.010G253700 - -
11 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
12 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
13 Sobic.009G258150 - -
14 Sobic.006G093400 potassium channel SKOR, putative, expressed -
15 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
16 Sobic.009G225300 - -
17 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
19 Sobic.009G114900 - -
20 Sobic.009G083100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G537600 Sobic001G537600 Sobic010G106400 Sobic010G106400 Sobic001G537600--Sobic010G106400 Sobic001G068901 Sobic001G068901 Sobic001G537600--Sobic001G068901 Sobic006G146400 Sobic006G146400 Sobic001G537600--Sobic006G146400 Sobic009G238200 Sobic009G238200 Sobic001G537600--Sobic009G238200 Sobic006G280900 Sobic006G280900 Sobic001G537600--Sobic006G280900 Sobic006G065200 Sobic006G065200 Sobic001G537600--Sobic006G065200 Sobic010G257300 Sobic010G257300 Sobic001G537600--Sobic010G257300 Sobic004G012100 Sobic004G012100 Sobic001G537600--Sobic004G012100 Sobic006G103601 Sobic006G103601 Sobic001G537600--Sobic006G103601 Sobic010G106400--Sobic001G537600 Sobic010G106400--Sobic009G238200 Sobic010G106400--Sobic006G065200 Sobic010G106400--Sobic006G103601 Sobic010G106400--Sobic001G068901 Sobic009G258150 Sobic009G258150 Sobic010G106400--Sobic009G258150 Sobic010G106400--Sobic006G280900 Sobic010G106400--Sobic004G012100 Sobic010G106400--Sobic006G146400 Sobic001G068901--Sobic001G537600 Sobic010G242100 Sobic010G242100 Sobic001G068901--Sobic010G242100 Sobic006G093400 Sobic006G093400 Sobic001G068901--Sobic006G093400 Sobic009G072400 Sobic009G072400 Sobic001G068901--Sobic009G072400 Sobic001G068901--Sobic010G257300 Sobic010G253700 Sobic010G253700 Sobic001G068901--Sobic010G253700 Sobic001G068901--Sobic004G012100 Sobic001G068901--Sobic010G106400 Sobic001G308450 Sobic001G308450 Sobic001G068901--Sobic001G308450 Sobic006G146400--Sobic006G280900 Sobic006G222650 Sobic006G222650 Sobic006G146400--Sobic006G222650 Sobic002G116300 Sobic002G116300 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic006G146400--Sobic001G537600 Sobic004G302400 Sobic004G302400 Sobic006G146400--Sobic004G302400 Sobic010G035300 Sobic010G035300 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic003G379500 Sobic003G379500 Sobic006G146400--Sobic003G379500 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic003G167825 Sobic003G167825 Sobic009G238200--Sobic003G167825 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G085600 Sobic009G085600 Sobic009G238200--Sobic009G085600 Sobic003G126400 Sobic003G126400 Sobic009G238200--Sobic003G126400 Sobic006G280900--Sobic006G146400 Sobic006G280900--Sobic006G222650 Sobic006G280900--Sobic004G302400 Sobic006G280900--Sobic001G537600 Sobic009G083100 Sobic009G083100 Sobic006G280900--Sobic009G083100 Sobic006G280900--Sobic009G238200 Sobic006G280900--Sobic002G116300 Sobic006G280900--Sobic010G106400 Sobic006G280900--Sobic010G035300 Sobic006G065200--Sobic010G106400 Sobic006G065200--Sobic001G537600 Sobic007G165200 Sobic007G165200 Sobic006G065200--Sobic007G165200 Sobic006G065200--Sobic006G280900 Sobic006G065200--Sobic001G068901 Sobic006G065200--Sobic006G103601 Sobic006G065200--Sobic001G308450 Sobic001G543600 Sobic001G543600 Sobic006G065200--Sobic001G543600 Sobic006G065200--Sobic009G238200 Sobic010G257300--Sobic006G093400 Sobic010G257300--Sobic004G012100 Sobic010G257300--Sobic009G258150 Sobic010G257300--Sobic001G068901 Sobic010G257300--Sobic010G253700 Sobic010G257300--Sobic001G537600 Sobic010G257300--Sobic009G072400 Sobic008G096900 Sobic008G096900 Sobic010G257300--Sobic008G096900 Sobic010G257300--Sobic003G379500 Sobic004G012100--Sobic010G253700 Sobic004G012100--Sobic010G257300 Sobic004G012100--Sobic010G242100 Sobic004G012100--Sobic001G068901 Sobic004G012100--Sobic001G537600 Sobic004G012100--Sobic009G258150 Sobic004G012100--Sobic003G379500 Sobic006G229600 Sobic006G229600 Sobic004G012100--Sobic006G229600 Sobic004G012100--Sobic006G093400 Sobic006G103601--Sobic009G238200 Sobic002G285800 Sobic002G285800 Sobic006G103601--Sobic002G285800 Sobic006G103601--Sobic010G106400 Sobic006G103601--Sobic002G116300 Sobic006G103601--Sobic006G146400 Sobic009G174600 Sobic009G174600 Sobic006G103601--Sobic009G174600 Sobic006G103601--Sobic001G537600 Sobic006G103601--Sobic003G379500 Sobic006G103601--Sobic009G258150
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.