Gene annotation
Transcriptome id Sobic.004G012100.2,Sobic.004G012100.1
Synonym ILR3, Sb04g001200, bHLH105
Functional annotation basic helix-loop-helix DND-binding domain containing protein, expressed
UniProt A0A194YM80 , A0A194YN84
Pfam PF00010
Panther DB PTHR23042 PTHR23042:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54680 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g02480.3,LOC_Os02g02480.1 : basic helix-loop-helix DND-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018712 , Zm00025a035060
Brachypodium -
Barley -
Wheat TraesCS6D02G051600 , TraesCS6D02G051600 , TraesCS6B02G060700 , TraesCS6B02G060700
Populus -


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cDNA sequences
Sobic.004G012100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G253700 - -
2 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
3 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
4 Sobic.001G068901 - -
5 Sobic.001G537600 expressed protein -
6 Sobic.009G258150 - -
7 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
8 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
9 Sobic.006G093400 potassium channel SKOR, putative, expressed -
10 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
11 Sobic.010G106400 - -
12 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
13 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.006G069050 - -
16 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
17 Sobic.003G126400 expressed protein -
18 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.006G058300 expressed protein -
20 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22


Gene co-expression network
sample Sobic004G012100 Sobic004G012100 Sobic010G253700 Sobic010G253700 Sobic004G012100--Sobic010G253700 Sobic010G257300 Sobic010G257300 Sobic004G012100--Sobic010G257300 Sobic010G242100 Sobic010G242100 Sobic004G012100--Sobic010G242100 Sobic001G068901 Sobic001G068901 Sobic004G012100--Sobic001G068901 Sobic001G537600 Sobic001G537600 Sobic004G012100--Sobic001G537600 Sobic009G258150 Sobic009G258150 Sobic004G012100--Sobic009G258150 Sobic003G379500 Sobic003G379500 Sobic004G012100--Sobic003G379500 Sobic006G229600 Sobic006G229600 Sobic004G012100--Sobic006G229600 Sobic006G093400 Sobic006G093400 Sobic004G012100--Sobic006G093400 Sobic010G253700--Sobic004G012100 Sobic010G253700--Sobic010G242100 Sobic010G253700--Sobic001G068901 Sobic010G253700--Sobic010G257300 Sobic010G253700--Sobic001G537600 Sobic010G253700--Sobic006G093400 Sobic008G096900 Sobic008G096900 Sobic010G253700--Sobic008G096900 Sobic010G106400 Sobic010G106400 Sobic010G253700--Sobic010G106400 Sobic009G114900 Sobic009G114900 Sobic010G253700--Sobic009G114900 Sobic010G257300--Sobic006G093400 Sobic010G257300--Sobic004G012100 Sobic010G257300--Sobic009G258150 Sobic010G257300--Sobic001G068901 Sobic010G257300--Sobic010G253700 Sobic010G257300--Sobic001G537600 Sobic009G072400 Sobic009G072400 Sobic010G257300--Sobic009G072400 Sobic010G257300--Sobic008G096900 Sobic010G257300--Sobic003G379500 Sobic010G242100--Sobic001G068901 Sobic010G242100--Sobic010G253700 Sobic010G242100--Sobic004G012100 Sobic010G242100--Sobic001G537600 Sobic010G197400 Sobic010G197400 Sobic010G242100--Sobic010G197400 Sobic010G242100--Sobic010G257300 Sobic010G242100--Sobic009G072400 Sobic010G242100--Sobic010G106400 Sobic009G225300 Sobic009G225300 Sobic010G242100--Sobic009G225300 Sobic001G068901--Sobic001G537600 Sobic001G068901--Sobic010G242100 Sobic001G068901--Sobic006G093400 Sobic001G068901--Sobic009G072400 Sobic001G068901--Sobic010G257300 Sobic001G068901--Sobic010G253700 Sobic001G068901--Sobic004G012100 Sobic001G068901--Sobic010G106400 Sobic001G308450 Sobic001G308450 Sobic001G068901--Sobic001G308450 Sobic001G537600--Sobic010G106400 Sobic001G537600--Sobic001G068901 Sobic006G146400 Sobic006G146400 Sobic001G537600--Sobic006G146400 Sobic009G238200 Sobic009G238200 Sobic001G537600--Sobic009G238200 Sobic006G280900 Sobic006G280900 Sobic001G537600--Sobic006G280900 Sobic006G065200 Sobic006G065200 Sobic001G537600--Sobic006G065200 Sobic001G537600--Sobic010G257300 Sobic001G537600--Sobic004G012100 Sobic006G103601 Sobic006G103601 Sobic001G537600--Sobic006G103601 Sobic009G258150--Sobic003G379500 Sobic001G115900 Sobic001G115900 Sobic009G258150--Sobic001G115900 Sobic003G038300 Sobic003G038300 Sobic009G258150--Sobic003G038300 Sobic009G258150--Sobic009G238200 Sobic006G069050 Sobic006G069050 Sobic009G258150--Sobic006G069050 Sobic003G126400 Sobic003G126400 Sobic009G258150--Sobic003G126400 Sobic004G152501 Sobic004G152501 Sobic009G258150--Sobic004G152501 Sobic009G258150--Sobic010G257300 Sobic010G244701 Sobic010G244701 Sobic009G258150--Sobic010G244701 Sobic003G379500--Sobic001G115900 Sobic003G379500--Sobic009G258150 Sobic003G379500--Sobic010G244701 Sobic003G379500--Sobic003G126400 Sobic003G379500--Sobic009G238200 Sobic003G167825 Sobic003G167825 Sobic003G379500--Sobic003G167825 Sobic003G379500--Sobic003G038300 Sobic003G379500--Sobic006G103601 Sobic003G379500--Sobic006G146400 Sobic002G271900 Sobic002G271900 Sobic006G229600--Sobic002G271900 Sobic006G229600--Sobic006G069050 Sobic006G229600--Sobic009G258150 Sobic006G229600--Sobic004G012100 Sobic006G229600--Sobic004G152501 Sobic006G058300 Sobic006G058300 Sobic006G229600--Sobic006G058300 Sobic006G229600--Sobic003G126400 Sobic002G133600 Sobic002G133600 Sobic006G229600--Sobic002G133600 Sobic006G229600--Sobic010G257300 Sobic006G093400--Sobic010G257300 Sobic006G093400--Sobic001G068901 Sobic006G232300 Sobic006G232300 Sobic006G093400--Sobic006G232300 Sobic006G093400--Sobic009G114900 Sobic006G093400--Sobic010G253700 Sobic006G093400--Sobic004G012100 Sobic005G155001 Sobic005G155001 Sobic006G093400--Sobic005G155001 Sobic001G483200 Sobic001G483200 Sobic006G093400--Sobic001G483200 Sobic006G093400--Sobic001G537600
Octagon: transcription factors


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