Gene annotation
Transcriptome id Sobic.006G229600.5,Sobic.006G229600.4,Sobic.006G229600.3,Sobic.006G229600.1
Synonym B120
Functional annotation serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt A0A1Z5RFW8 , A0A1Z5RF79 , A0A1Z5RF61 , A0A1B6PNF9
Pfam PF00954 PF08276 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF69
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21390 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os04g54002.1 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a009643 , Zm00025a057135 , Zm00025a057121
Brachypodium KQJ95152 , PNT61920 , PNT61921 , PNT61934 , KQJ84820 , PNT61913 , PNT61915 , PNT61919 , PNT61918 , KQJ84800 , KQJ84806 , KQJ84807 , PNT65692 , KQJ84816 , KQJ92830
Barley HORVU7Hr1G031210.70 , HORVU7Hr1G031210.71 , HORVU7Hr1G031210.72 , HORVU7Hr1G031210.73 , HORVU7Hr1G031210.74 , HORVU7Hr1G031210.75 , HORVU7Hr1G031210.76 , HORVU7Hr1G031210.77 , HORVU7Hr1G031210.78 , HORVU7Hr1G031210.79 , HORVU2Hr1G004830.1 , HORVU2Hr1G004830.2 , HORVU7Hr1G031210.58 , HORVU7Hr1G031210.59 , HORVU7Hr1G031210.52 , HORVU7Hr1G031210.53 , HORVU7Hr1G031210.50 , HORVU7Hr1G031210.51 , HORVU7Hr1G031210.56 , HORVU7Hr1G031210.57 , HORVU7Hr1G031210.54 , HORVU7Hr1G031210.55 , HORVU7Hr1G031210.38 , HORVU7Hr1G031210.39 , HORVU7Hr1G031210.36 , HORVU7Hr1G031210.37 , HORVU7Hr1G031210.30 , HORVU7Hr1G031210.31 , HORVU7Hr1G031210.16 , HORVU7Hr1G031210.17 , HORVU7Hr1G031210.14 , HORVU7Hr1G031210.15 , HORVU7Hr1G031210.13 , HORVU7Hr1G031210.18 , HORVU7Hr1G031210.19 , HORVU7Hr1G031210.4 , HORVU7Hr1G031210.5 , HORVU7Hr1G031210.6 , HORVU7Hr1G031210.7 , HORVU7Hr1G031210.1 , HORVU7Hr1G031210.2 , HORVU7Hr1G031210.3 , HORVU7Hr1G031210.8 , HORVU2Hr1G117360.5 , HORVU7Hr1G031210.62 , HORVU7Hr1G031210.61 , HORVU7Hr1G031210.60 , HORVU7Hr1G031210.67 , HORVU7Hr1G031210.66 , HORVU7Hr1G031210.65 , HORVU7Hr1G031210.69 , HORVU2Hr1G117360.27 , HORVU2Hr1G117360.21 , HORVU2Hr1G117360.23 , HORVU7Hr1G031210.81 , HORVU2Hr1G117680.1 , HORVU2Hr1G117680.3 , HORVU2Hr1G117680.2 , HORVU2Hr1G117680.5 , HORVU2Hr1G117680.4 , HORVU7Hr1G031210.64 , HORVU7Hr1G031210.68 , HORVU2Hr1G108490.14 , HORVU7Hr1G031210.45 , HORVU7Hr1G031210.44 , HORVU7Hr1G031210.47 , HORVU7Hr1G031210.46 , HORVU7Hr1G031210.41 , HORVU7Hr1G031210.40 , HORVU7Hr1G031210.43 , HORVU7Hr1G031210.42 , HORVU7Hr1G031210.49 , HORVU7Hr1G031210.48 , HORVU7Hr1G031210.80 , HORVU7Hr1G031210.27 , HORVU7Hr1G031210.26 , HORVU7Hr1G031210.25 , HORVU7Hr1G031210.24 , HORVU7Hr1G031210.23 , HORVU7Hr1G031210.22 , HORVU7Hr1G031210.21 , HORVU7Hr1G031210.20 , HORVU7Hr1G031210.29 , HORVU7Hr1G031210.28 , HORVU7Hr1G031210.63 , HORVU7Hr1G031210.84 , HORVU7Hr1G031210.83 , HORVU7Hr1G031210.82 , HORVU7Hr1G031210.85 , HORVU7Hr1G031210.34 , HORVU7Hr1G031210.35 , HORVU7Hr1G031210.32 , HORVU7Hr1G031210.33 , HORVU2Hr1G117360.10 , HORVU2Hr1G117360.11 , HORVU2Hr1G117360.14 , HORVU2Hr1G117360.15 , HORVU2Hr1G117360.16 , HORVU2Hr1G117360.17 , HORVU2Hr1G117360.19
Wheat TraesCS2B02G511300 , TraesCS2B02G512300 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2A02G534400 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G537700 , TraesCS2D02G538400 , TraesCS7A02G152100 , TraesCS2B02G512200 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS2D02G484700 , TraesCS2A02G538100 , TraesCS2D02G537700 , TraesCS2D02G536900 , TraesCS2D02G536900 , TraesCS2A02G536300 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2B02G565000 , TraesCS2D02G031600 , TraesCS2B02G567800 , TraesCS2B02G567800 , TraesCS2B02G567800 , TraesCS3D02G118900 , TraesCS2B02G567700 , TraesCS2A02G536300 , TraesCS2A02G536300 , TraesCS2A02G536300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
2 Sobic.006G069050 - -
3 Sobic.009G258150 - -
4 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
5 Sobic.004G152501 - -
6 Sobic.006G058300 expressed protein -
7 Sobic.003G126400 expressed protein -
8 Sobic.002G133600 - -
9 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
10 Sobic.009G004300 ECT protein, putative, expressed -
11 Sobic.003G038300 - -
12 Sobic.010G155901 - -
13 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.010G253700 - -
15 Sobic.006G053000 heavy metal-associated domain containing protein, expressed -
16 Sobic.010G106400 - -
17 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.006G110600 - -
19 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
20 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -


Gene co-expression network
sample Sobic006G229600 Sobic006G229600 Sobic002G271900 Sobic002G271900 Sobic006G229600--Sobic002G271900 Sobic006G069050 Sobic006G069050 Sobic006G229600--Sobic006G069050 Sobic009G258150 Sobic009G258150 Sobic006G229600--Sobic009G258150 Sobic004G012100 Sobic004G012100 Sobic006G229600--Sobic004G012100 Sobic004G152501 Sobic004G152501 Sobic006G229600--Sobic004G152501 Sobic006G058300 Sobic006G058300 Sobic006G229600--Sobic006G058300 Sobic003G126400 Sobic003G126400 Sobic006G229600--Sobic003G126400 Sobic002G133600 Sobic002G133600 Sobic006G229600--Sobic002G133600 Sobic010G257300 Sobic010G257300 Sobic006G229600--Sobic010G257300 Sobic002G271900--Sobic006G229600 Sobic009G004300 Sobic009G004300 Sobic002G271900--Sobic009G004300 Sobic002G326200 Sobic002G326200 Sobic002G271900--Sobic002G326200 Sobic002G271900--Sobic002G133600 Sobic006G110600 Sobic006G110600 Sobic002G271900--Sobic006G110600 Sobic002G271900--Sobic006G058300 Sobic002G271900--Sobic004G012100 Sobic010G155901 Sobic010G155901 Sobic002G271900--Sobic010G155901 Sobic002G271900--Sobic009G258150 Sobic006G069050--Sobic003G126400 Sobic003G038300 Sobic003G038300 Sobic006G069050--Sobic003G038300 Sobic006G069050--Sobic004G152501 Sobic001G115900 Sobic001G115900 Sobic006G069050--Sobic001G115900 Sobic003G065001 Sobic003G065001 Sobic006G069050--Sobic003G065001 Sobic006G069050--Sobic006G058300 Sobic010G201000 Sobic010G201000 Sobic006G069050--Sobic010G201000 Sobic003G167825 Sobic003G167825 Sobic006G069050--Sobic003G167825 Sobic010G074980 Sobic010G074980 Sobic006G069050--Sobic010G074980 Sobic003G379500 Sobic003G379500 Sobic009G258150--Sobic003G379500 Sobic009G258150--Sobic001G115900 Sobic009G258150--Sobic003G038300 Sobic009G238200 Sobic009G238200 Sobic009G258150--Sobic009G238200 Sobic009G258150--Sobic006G069050 Sobic009G258150--Sobic003G126400 Sobic009G258150--Sobic004G152501 Sobic009G258150--Sobic010G257300 Sobic010G244701 Sobic010G244701 Sobic009G258150--Sobic010G244701 Sobic010G253700 Sobic010G253700 Sobic004G012100--Sobic010G253700 Sobic004G012100--Sobic010G257300 Sobic010G242100 Sobic010G242100 Sobic004G012100--Sobic010G242100 Sobic001G068901 Sobic001G068901 Sobic004G012100--Sobic001G068901 Sobic001G537600 Sobic001G537600 Sobic004G012100--Sobic001G537600 Sobic004G012100--Sobic009G258150 Sobic004G012100--Sobic003G379500 Sobic004G012100--Sobic006G229600 Sobic006G093400 Sobic006G093400 Sobic004G012100--Sobic006G093400 Sobic004G152501--Sobic006G069050 Sobic004G152501--Sobic003G038300 Sobic004G152501--Sobic003G126400 Sobic004G152501--Sobic010G201000 Sobic004G152501--Sobic010G074980 Sobic004G152501--Sobic001G115900 Sobic004G082151 Sobic004G082151 Sobic004G152501--Sobic004G082151 Sobic003G427500 Sobic003G427500 Sobic004G152501--Sobic003G427500 Sobic004G152501--Sobic009G258150 Sobic003G149900 Sobic003G149900 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic006G058300--Sobic003G038300 Sobic006G058300--Sobic003G126400 Sobic006G058300--Sobic006G069050 Sobic008G020300 Sobic008G020300 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic006G058300--Sobic001G537900 Sobic001G407000 Sobic001G407000 Sobic006G058300--Sobic001G407000 Sobic003G126400--Sobic006G069050 Sobic003G126400--Sobic001G115900 Sobic003G126400--Sobic003G038300 Sobic003G126400--Sobic003G427500 Sobic003G126400--Sobic003G167825 Sobic003G126400--Sobic010G201000 Sobic007G093400 Sobic007G093400 Sobic003G126400--Sobic007G093400 Sobic003G126400--Sobic003G065001 Sobic003G126400--Sobic004G152501 Sobic003G101600 Sobic003G101600 Sobic002G133600--Sobic003G101600 Sobic002G133600--Sobic002G271900 Sobic004G314750 Sobic004G314750 Sobic002G133600--Sobic004G314750 Sobic002G133600--Sobic006G229600 Sobic002G133600--Sobic004G152501 Sobic003G313700 Sobic003G313700 Sobic002G133600--Sobic003G313700 Sobic006G257500 Sobic006G257500 Sobic002G133600--Sobic006G257500 Sobic002G133600--Sobic009G004300 Sobic008G166250 Sobic008G166250 Sobic002G133600--Sobic008G166250 Sobic010G257300--Sobic006G093400 Sobic010G257300--Sobic004G012100 Sobic010G257300--Sobic009G258150 Sobic010G257300--Sobic001G068901 Sobic010G257300--Sobic010G253700 Sobic010G257300--Sobic001G537600 Sobic009G072400 Sobic009G072400 Sobic010G257300--Sobic009G072400 Sobic008G096900 Sobic008G096900 Sobic010G257300--Sobic008G096900 Sobic010G257300--Sobic003G379500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.