Gene annotation
Transcriptome id Sobic.006G058300.1,Sobic.006G058300.2
Synonym Sb06g014630
Functional annotation expressed protein
UniProt A0A1Z5RCJ3 , A0A1B6PKG0
Pfam -
Panther DB PTHR13445 PTHR13445:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13970 : -
RAP-DB (Rice) LOC_Os04g32580.1 : expressed protein
MaizeGDB (Corn) Zm00025a011669 , Zm00025a055940
Brachypodium KQJ82364
Barley HORVU2Hr1G071110.1 , HORVU2Hr1G071110.4 , HORVU2Hr1G071110.3 , HORVU2Hr1G071110.2
Wheat TraesCS2D02G285900 , TraesCS2D02G285900 , TraesCS2B02G304300 , TraesCS2B02G304300 , TraesCS2B02G304300 , TraesCS2B02G304300 , TraesCS2A02G287500 , TraesCS2A02G287500 , TraesCS2A02G287500
Populus -


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cDNA sequences
Sobic.006G058300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
2 Sobic.004G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.003G038300 - -
4 Sobic.003G126400 expressed protein -
5 Sobic.006G069050 - -
6 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.009G152901 - -
8 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
9 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
10 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
11 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
12 Sobic.010G155901 - -
13 Sobic.005G076100 rp3 protein, putative, expressed -
14 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
15 Sobic.004G239000 - -
16 Sobic.010G201000 - -
17 Sobic.009G082400 - -
18 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
19 Sobic.003G008850 - -
20 Sobic.003G105300 - -


Gene co-expression network
sample Sobic006G058300 Sobic006G058300 Sobic003G149900 Sobic003G149900 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic006G058300--Sobic003G038300 Sobic003G126400 Sobic003G126400 Sobic006G058300--Sobic003G126400 Sobic006G069050 Sobic006G069050 Sobic006G058300--Sobic006G069050 Sobic008G020300 Sobic008G020300 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic006G058300--Sobic001G537900 Sobic001G407000 Sobic001G407000 Sobic006G058300--Sobic001G407000 Sobic003G149900--Sobic006G058300 Sobic003G149900--Sobic009G152901 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic003G149900--Sobic004G016600 Sobic004G354800 Sobic004G354800 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G149900--Sobic003G038300 Sobic004G016600--Sobic001G120100 Sobic004G016600--Sobic001G016900 Sobic009G085600 Sobic009G085600 Sobic004G016600--Sobic009G085600 Sobic004G251350 Sobic004G251350 Sobic004G016600--Sobic004G251350 Sobic004G016600--Sobic001G537900 Sobic007G013100 Sobic007G013100 Sobic004G016600--Sobic007G013100 Sobic003G167825 Sobic003G167825 Sobic004G016600--Sobic003G167825 Sobic007G111600 Sobic007G111600 Sobic004G016600--Sobic007G111600 Sobic004G016600--Sobic009G152901 Sobic003G038300--Sobic003G126400 Sobic003G038300--Sobic003G167825 Sobic003G038300--Sobic009G085600 Sobic003G038300--Sobic006G069050 Sobic001G115900 Sobic001G115900 Sobic003G038300--Sobic001G115900 Sobic003G038300--Sobic004G016600 Sobic010G201000 Sobic010G201000 Sobic003G038300--Sobic010G201000 Sobic003G038300--Sobic001G016900 Sobic004G152501 Sobic004G152501 Sobic003G038300--Sobic004G152501 Sobic003G126400--Sobic006G069050 Sobic003G126400--Sobic001G115900 Sobic003G126400--Sobic003G038300 Sobic003G427500 Sobic003G427500 Sobic003G126400--Sobic003G427500 Sobic003G126400--Sobic003G167825 Sobic003G126400--Sobic010G201000 Sobic007G093400 Sobic007G093400 Sobic003G126400--Sobic007G093400 Sobic003G065001 Sobic003G065001 Sobic003G126400--Sobic003G065001 Sobic003G126400--Sobic004G152501 Sobic006G069050--Sobic003G126400 Sobic006G069050--Sobic003G038300 Sobic006G069050--Sobic004G152501 Sobic006G069050--Sobic001G115900 Sobic006G069050--Sobic003G065001 Sobic006G069050--Sobic006G058300 Sobic006G069050--Sobic010G201000 Sobic006G069050--Sobic003G167825 Sobic010G074980 Sobic010G074980 Sobic006G069050--Sobic010G074980 Sobic008G020300--Sobic001G537900 Sobic003G105300 Sobic003G105300 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic001G255700 Sobic001G255700 Sobic008G020300--Sobic001G255700 Sobic009G163500 Sobic009G163500 Sobic008G020300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic008G020300--Sobic004G197300 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic004G239000 Sobic004G239000 Sobic009G152901--Sobic004G239000 Sobic009G152901--Sobic001G016900 Sobic003G367401 Sobic003G367401 Sobic009G152901--Sobic003G367401 Sobic009G152901--Sobic001G120100 Sobic009G152901--Sobic004G016600 Sobic003G368150 Sobic003G368150 Sobic009G152901--Sobic003G368150 Sobic009G152901--Sobic004G197300 Sobic009G152901--Sobic001G537900 Sobic009G152901--Sobic010G201000 Sobic001G537900--Sobic008G020300 Sobic001G537900--Sobic001G120100 Sobic010G179150 Sobic010G179150 Sobic001G537900--Sobic010G179150 Sobic001G537900--Sobic004G354800 Sobic001G537900--Sobic004G251350 Sobic001G537900--Sobic004G197300 Sobic001G537900--Sobic009G163500 Sobic003G008850 Sobic003G008850 Sobic001G537900--Sobic003G008850 Sobic001G537900--Sobic007G111600 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G541900 Sobic001G541900 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900
Octagon: transcription factors


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