Gene annotation
Transcriptome id Sobic.009G258150.4,Sobic.009G258150.2,Sobic.009G258150.1,Sobic.009G258150.3
Synonym -
Functional annotation -
UniProt A0A1Z5R471 , A0A1Z5R423
Pfam PF08137
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13245 : ROTUNDIFOLIA like 17
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
2 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
3 Sobic.003G038300 - -
4 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
5 Sobic.006G069050 - -
6 Sobic.003G126400 expressed protein -
7 Sobic.004G152501 - -
8 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
9 Sobic.010G244701 - -
10 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
11 Sobic.001G204200 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
13 Sobic.006G103601 - -
14 Sobic.010G106400 - -
15 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.006G037000 - -
17 Sobic.001G537600 expressed protein -
18 Sobic.009G250800 Up-reguralion under heat(PubMedID : 24916767)@polygalacturonase, putative, expressed -
19 Sobic.003G167825 - -
20 Sobic.009G085600 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic009G258150 Sobic009G258150 Sobic003G379500 Sobic003G379500 Sobic009G258150--Sobic003G379500 Sobic001G115900 Sobic001G115900 Sobic009G258150--Sobic001G115900 Sobic003G038300 Sobic003G038300 Sobic009G258150--Sobic003G038300 Sobic009G238200 Sobic009G238200 Sobic009G258150--Sobic009G238200 Sobic006G069050 Sobic006G069050 Sobic009G258150--Sobic006G069050 Sobic003G126400 Sobic003G126400 Sobic009G258150--Sobic003G126400 Sobic004G152501 Sobic004G152501 Sobic009G258150--Sobic004G152501 Sobic010G257300 Sobic010G257300 Sobic009G258150--Sobic010G257300 Sobic010G244701 Sobic010G244701 Sobic009G258150--Sobic010G244701 Sobic003G379500--Sobic001G115900 Sobic003G379500--Sobic009G258150 Sobic003G379500--Sobic010G244701 Sobic003G379500--Sobic003G126400 Sobic003G379500--Sobic009G238200 Sobic003G167825 Sobic003G167825 Sobic003G379500--Sobic003G167825 Sobic003G379500--Sobic003G038300 Sobic006G103601 Sobic006G103601 Sobic003G379500--Sobic006G103601 Sobic006G146400 Sobic006G146400 Sobic003G379500--Sobic006G146400 Sobic001G115900--Sobic003G126400 Sobic001G115900--Sobic003G379500 Sobic001G115900--Sobic003G038300 Sobic001G115900--Sobic006G069050 Sobic003G065001 Sobic003G065001 Sobic001G115900--Sobic003G065001 Sobic001G115900--Sobic009G258150 Sobic001G115900--Sobic003G167825 Sobic009G085600 Sobic009G085600 Sobic001G115900--Sobic009G085600 Sobic003G367401 Sobic003G367401 Sobic001G115900--Sobic003G367401 Sobic003G038300--Sobic003G126400 Sobic003G038300--Sobic003G167825 Sobic003G038300--Sobic009G085600 Sobic003G038300--Sobic006G069050 Sobic003G038300--Sobic001G115900 Sobic004G016600 Sobic004G016600 Sobic003G038300--Sobic004G016600 Sobic010G201000 Sobic010G201000 Sobic003G038300--Sobic010G201000 Sobic001G016900 Sobic001G016900 Sobic003G038300--Sobic001G016900 Sobic003G038300--Sobic004G152501 Sobic002G116300 Sobic002G116300 Sobic009G238200--Sobic002G116300 Sobic009G238200--Sobic001G115900 Sobic009G238200--Sobic003G167825 Sobic009G238200--Sobic006G103601 Sobic009G238200--Sobic006G069050 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G238200--Sobic009G085600 Sobic009G238200--Sobic003G126400 Sobic006G069050--Sobic003G126400 Sobic006G069050--Sobic003G038300 Sobic006G069050--Sobic004G152501 Sobic006G069050--Sobic001G115900 Sobic006G069050--Sobic003G065001 Sobic006G058300 Sobic006G058300 Sobic006G069050--Sobic006G058300 Sobic006G069050--Sobic010G201000 Sobic006G069050--Sobic003G167825 Sobic010G074980 Sobic010G074980 Sobic006G069050--Sobic010G074980 Sobic003G126400--Sobic006G069050 Sobic003G126400--Sobic001G115900 Sobic003G126400--Sobic003G038300 Sobic003G427500 Sobic003G427500 Sobic003G126400--Sobic003G427500 Sobic003G126400--Sobic003G167825 Sobic003G126400--Sobic010G201000 Sobic007G093400 Sobic007G093400 Sobic003G126400--Sobic007G093400 Sobic003G126400--Sobic003G065001 Sobic003G126400--Sobic004G152501 Sobic004G152501--Sobic006G069050 Sobic004G152501--Sobic003G038300 Sobic004G152501--Sobic003G126400 Sobic004G152501--Sobic010G201000 Sobic004G152501--Sobic010G074980 Sobic004G152501--Sobic001G115900 Sobic004G082151 Sobic004G082151 Sobic004G152501--Sobic004G082151 Sobic004G152501--Sobic003G427500 Sobic004G152501--Sobic009G258150 Sobic006G093400 Sobic006G093400 Sobic010G257300--Sobic006G093400 Sobic004G012100 Sobic004G012100 Sobic010G257300--Sobic004G012100 Sobic010G257300--Sobic009G258150 Sobic001G068901 Sobic001G068901 Sobic010G257300--Sobic001G068901 Sobic010G253700 Sobic010G253700 Sobic010G257300--Sobic010G253700 Sobic001G537600 Sobic001G537600 Sobic010G257300--Sobic001G537600 Sobic009G072400 Sobic009G072400 Sobic010G257300--Sobic009G072400 Sobic008G096900 Sobic008G096900 Sobic010G257300--Sobic008G096900 Sobic010G257300--Sobic003G379500 Sobic006G256801 Sobic006G256801 Sobic010G244701--Sobic006G256801 Sobic010G244701--Sobic003G379500 Sobic004G314750 Sobic004G314750 Sobic010G244701--Sobic004G314750 Sobic001G434450 Sobic001G434450 Sobic010G244701--Sobic001G434450 Sobic008G164525 Sobic008G164525 Sobic010G244701--Sobic008G164525 Sobic001G089200 Sobic001G089200 Sobic010G244701--Sobic001G089200 Sobic010G244701--Sobic001G115900 Sobic010G244701--Sobic009G258150 Sobic010G244701--Sobic009G085600
Octagon: transcription factors


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