Gene annotation
Transcriptome id Sobic.010G106400.1
Synonym
Functional annotation -
UniProt A0A194YIE6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G537600 expressed protein -
2 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
3 Sobic.006G065200 SAM domain family protein, expressed -
4 Sobic.006G103601 - -
5 Sobic.001G068901 - -
6 Sobic.009G258150 - -
7 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
9 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.009G225300 - -
11 Sobic.003G126400 expressed protein -
12 Sobic.010G253700 - -
13 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
14 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
15 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
16 Sobic.006G069050 - -
17 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
18 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
19 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
20 Sobic.002G116300 poly synthetase 1, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4


Gene co-expression network
sample Sobic010G106400 Sobic010G106400 Sobic001G537600 Sobic001G537600 Sobic010G106400--Sobic001G537600 Sobic009G238200 Sobic009G238200 Sobic010G106400--Sobic009G238200 Sobic006G065200 Sobic006G065200 Sobic010G106400--Sobic006G065200 Sobic006G103601 Sobic006G103601 Sobic010G106400--Sobic006G103601 Sobic001G068901 Sobic001G068901 Sobic010G106400--Sobic001G068901 Sobic009G258150 Sobic009G258150 Sobic010G106400--Sobic009G258150 Sobic006G280900 Sobic006G280900 Sobic010G106400--Sobic006G280900 Sobic004G012100 Sobic004G012100 Sobic010G106400--Sobic004G012100 Sobic006G146400 Sobic006G146400 Sobic010G106400--Sobic006G146400 Sobic001G537600--Sobic010G106400 Sobic001G537600--Sobic001G068901 Sobic001G537600--Sobic006G146400 Sobic001G537600--Sobic009G238200 Sobic001G537600--Sobic006G280900 Sobic001G537600--Sobic006G065200 Sobic010G257300 Sobic010G257300 Sobic001G537600--Sobic010G257300 Sobic001G537600--Sobic004G012100 Sobic001G537600--Sobic006G103601 Sobic002G116300 Sobic002G116300 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic003G167825 Sobic003G167825 Sobic009G238200--Sobic003G167825 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G085600 Sobic009G085600 Sobic009G238200--Sobic009G085600 Sobic003G126400 Sobic003G126400 Sobic009G238200--Sobic003G126400 Sobic006G065200--Sobic010G106400 Sobic006G065200--Sobic001G537600 Sobic007G165200 Sobic007G165200 Sobic006G065200--Sobic007G165200 Sobic006G065200--Sobic006G280900 Sobic006G065200--Sobic001G068901 Sobic006G065200--Sobic006G103601 Sobic001G308450 Sobic001G308450 Sobic006G065200--Sobic001G308450 Sobic001G543600 Sobic001G543600 Sobic006G065200--Sobic001G543600 Sobic006G065200--Sobic009G238200 Sobic006G103601--Sobic009G238200 Sobic002G285800 Sobic002G285800 Sobic006G103601--Sobic002G285800 Sobic006G103601--Sobic010G106400 Sobic006G103601--Sobic002G116300 Sobic006G103601--Sobic006G146400 Sobic009G174600 Sobic009G174600 Sobic006G103601--Sobic009G174600 Sobic006G103601--Sobic001G537600 Sobic003G379500 Sobic003G379500 Sobic006G103601--Sobic003G379500 Sobic006G103601--Sobic009G258150 Sobic001G068901--Sobic001G537600 Sobic010G242100 Sobic010G242100 Sobic001G068901--Sobic010G242100 Sobic006G093400 Sobic006G093400 Sobic001G068901--Sobic006G093400 Sobic009G072400 Sobic009G072400 Sobic001G068901--Sobic009G072400 Sobic001G068901--Sobic010G257300 Sobic010G253700 Sobic010G253700 Sobic001G068901--Sobic010G253700 Sobic001G068901--Sobic004G012100 Sobic001G068901--Sobic010G106400 Sobic001G068901--Sobic001G308450 Sobic009G258150--Sobic003G379500 Sobic009G258150--Sobic001G115900 Sobic003G038300 Sobic003G038300 Sobic009G258150--Sobic003G038300 Sobic009G258150--Sobic009G238200 Sobic009G258150--Sobic006G069050 Sobic009G258150--Sobic003G126400 Sobic004G152501 Sobic004G152501 Sobic009G258150--Sobic004G152501 Sobic009G258150--Sobic010G257300 Sobic010G244701 Sobic010G244701 Sobic009G258150--Sobic010G244701 Sobic006G280900--Sobic006G146400 Sobic006G222650 Sobic006G222650 Sobic006G280900--Sobic006G222650 Sobic004G302400 Sobic004G302400 Sobic006G280900--Sobic004G302400 Sobic006G280900--Sobic001G537600 Sobic009G083100 Sobic009G083100 Sobic006G280900--Sobic009G083100 Sobic006G280900--Sobic009G238200 Sobic006G280900--Sobic002G116300 Sobic006G280900--Sobic010G106400 Sobic010G035300 Sobic010G035300 Sobic006G280900--Sobic010G035300 Sobic004G012100--Sobic010G253700 Sobic004G012100--Sobic010G257300 Sobic004G012100--Sobic010G242100 Sobic004G012100--Sobic001G068901 Sobic004G012100--Sobic001G537600 Sobic004G012100--Sobic009G258150 Sobic004G012100--Sobic003G379500 Sobic006G229600 Sobic006G229600 Sobic004G012100--Sobic006G229600 Sobic004G012100--Sobic006G093400 Sobic006G146400--Sobic006G280900 Sobic006G146400--Sobic006G222650 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic006G146400--Sobic001G537600 Sobic006G146400--Sobic004G302400 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic006G146400--Sobic003G379500
Octagon: transcription factors


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