Gene annotation
Transcriptome id Sobic.001G204200.1
Synonym Sb01g018040
Functional annotation acetyltransferase, GNAT family, putative, expressed
UniProt C5WWG8
Pfam PF00583
Panther DB PTHR23091 PTHR23091:SF255
NCBI CDD KOG3139; N-acetyltransferase
KEGG Orthology -
Gene Ontology GO:0008080; N-acetyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G03650 : Acyl-CoA N-acyltransferases (NAT) superfamily protein
RAP-DB (Rice) LOC_Os10g35680.1 : acetyltransferase, GNAT family, putative, expressed
MaizeGDB (Corn) Zm00025a006444 , Zm00025a006436
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G204200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G258150 - -
2 Sobic.009G250800 Up-reguralion under heat(PubMedID : 24916767)@polygalacturonase, putative, expressed -
3 Sobic.006G103601 - -
4 Sobic.010G244701 - -
5 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
6 Sobic.002G076932 - -
7 Sobic.008G166250 - -
8 Sobic.005G094500 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
9 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
10 Sobic.006G093400 potassium channel SKOR, putative, expressed -
11 Sobic.004G184500 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
12 Sobic.009G170301 - -
13 Sobic.002G312600 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.004G102301 - -
15 Sobic.004G314750 - -
16 Sobic.008G054400 expressed protein -
17 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
19 Sobic.002G116300 poly synthetase 1, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
20 Sobic.001G537600 expressed protein -


Gene co-expression network
sample Sobic001G204200 Sobic001G204200 Sobic009G258150 Sobic009G258150 Sobic001G204200--Sobic009G258150 Sobic009G250800 Sobic009G250800 Sobic001G204200--Sobic009G250800 Sobic006G103601 Sobic006G103601 Sobic001G204200--Sobic006G103601 Sobic010G244701 Sobic010G244701 Sobic001G204200--Sobic010G244701 Sobic010G257300 Sobic010G257300 Sobic001G204200--Sobic010G257300 Sobic002G076932 Sobic002G076932 Sobic001G204200--Sobic002G076932 Sobic008G166250 Sobic008G166250 Sobic001G204200--Sobic008G166250 Sobic005G094500 Sobic005G094500 Sobic001G204200--Sobic005G094500 Sobic003G379500 Sobic003G379500 Sobic001G204200--Sobic003G379500 Sobic009G258150--Sobic003G379500 Sobic001G115900 Sobic001G115900 Sobic009G258150--Sobic001G115900 Sobic003G038300 Sobic003G038300 Sobic009G258150--Sobic003G038300 Sobic009G238200 Sobic009G238200 Sobic009G258150--Sobic009G238200 Sobic006G069050 Sobic006G069050 Sobic009G258150--Sobic006G069050 Sobic003G126400 Sobic003G126400 Sobic009G258150--Sobic003G126400 Sobic004G152501 Sobic004G152501 Sobic009G258150--Sobic004G152501 Sobic009G258150--Sobic010G257300 Sobic009G258150--Sobic010G244701 Sobic009G250800--Sobic003G379500 Sobic009G250800--Sobic010G244701 Sobic002G285800 Sobic002G285800 Sobic009G250800--Sobic002G285800 Sobic009G250800--Sobic009G258150 Sobic009G250800--Sobic001G204200 Sobic009G250800--Sobic006G103601 Sobic006G146400 Sobic006G146400 Sobic009G250800--Sobic006G146400 Sobic004G269500 Sobic004G269500 Sobic009G250800--Sobic004G269500 Sobic002G116300 Sobic002G116300 Sobic009G250800--Sobic002G116300 Sobic006G103601--Sobic009G238200 Sobic006G103601--Sobic002G285800 Sobic010G106400 Sobic010G106400 Sobic006G103601--Sobic010G106400 Sobic006G103601--Sobic002G116300 Sobic006G103601--Sobic006G146400 Sobic009G174600 Sobic009G174600 Sobic006G103601--Sobic009G174600 Sobic001G537600 Sobic001G537600 Sobic006G103601--Sobic001G537600 Sobic006G103601--Sobic003G379500 Sobic006G103601--Sobic009G258150 Sobic006G256801 Sobic006G256801 Sobic010G244701--Sobic006G256801 Sobic010G244701--Sobic003G379500 Sobic004G314750 Sobic004G314750 Sobic010G244701--Sobic004G314750 Sobic001G434450 Sobic001G434450 Sobic010G244701--Sobic001G434450 Sobic008G164525 Sobic008G164525 Sobic010G244701--Sobic008G164525 Sobic001G089200 Sobic001G089200 Sobic010G244701--Sobic001G089200 Sobic010G244701--Sobic001G115900 Sobic010G244701--Sobic009G258150 Sobic009G085600 Sobic009G085600 Sobic010G244701--Sobic009G085600 Sobic006G093400 Sobic006G093400 Sobic010G257300--Sobic006G093400 Sobic004G012100 Sobic004G012100 Sobic010G257300--Sobic004G012100 Sobic010G257300--Sobic009G258150 Sobic001G068901 Sobic001G068901 Sobic010G257300--Sobic001G068901 Sobic010G253700 Sobic010G253700 Sobic010G257300--Sobic010G253700 Sobic010G257300--Sobic001G537600 Sobic009G072400 Sobic009G072400 Sobic010G257300--Sobic009G072400 Sobic008G096900 Sobic008G096900 Sobic010G257300--Sobic008G096900 Sobic010G257300--Sobic003G379500 Sobic009G170301 Sobic009G170301 Sobic002G076932--Sobic009G170301 Sobic002G076932--Sobic005G094500 Sobic002G076932--Sobic001G204200 Sobic008G054400 Sobic008G054400 Sobic002G076932--Sobic008G054400 Sobic010G041500 Sobic010G041500 Sobic002G076932--Sobic010G041500 Sobic002G076932--Sobic008G166250 Sobic004G184500 Sobic004G184500 Sobic002G076932--Sobic004G184500 Sobic003G202900 Sobic003G202900 Sobic002G076932--Sobic003G202900 Sobic001G212701 Sobic001G212701 Sobic002G076932--Sobic001G212701 Sobic008G166250--Sobic004G184500 Sobic008G166250--Sobic005G094500 Sobic003G155350 Sobic003G155350 Sobic008G166250--Sobic003G155350 Sobic008G166250--Sobic004G314750 Sobic008G166250--Sobic001G204200 Sobic008G166250--Sobic008G054400 Sobic002G114600 Sobic002G114600 Sobic008G166250--Sobic002G114600 Sobic008G166250--Sobic001G212701 Sobic009G094000 Sobic009G094000 Sobic008G166250--Sobic009G094000 Sobic002G395900 Sobic002G395900 Sobic005G094500--Sobic002G395900 Sobic005G094500--Sobic004G184500 Sobic005G094500--Sobic003G202900 Sobic005G094500--Sobic003G155350 Sobic005G094500--Sobic002G076932 Sobic005G094500--Sobic009G170301 Sobic001G176800 Sobic001G176800 Sobic005G094500--Sobic001G176800 Sobic005G094500--Sobic008G166250 Sobic007G017300 Sobic007G017300 Sobic005G094500--Sobic007G017300 Sobic003G379500--Sobic001G115900 Sobic003G379500--Sobic009G258150 Sobic003G379500--Sobic010G244701 Sobic003G379500--Sobic003G126400 Sobic003G379500--Sobic009G238200 Sobic003G167825 Sobic003G167825 Sobic003G379500--Sobic003G167825 Sobic003G379500--Sobic003G038300 Sobic003G379500--Sobic006G103601 Sobic003G379500--Sobic006G146400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.