Gene annotation
Transcriptome id Sobic.005G094500.1
Synonym
Functional annotation senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
UniProt A0A1B6PR97
Pfam -
Panther DB PTHR27003 PTHR27003:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37050 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os11g01200.2 : senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G048950.10 , HORVU5Hr1G048950.5 , HORVU5Hr1G048950.4 , HORVU5Hr1G048950.7 , HORVU5Hr1G048950.6 , HORVU5Hr1G048950.3 , HORVU5Hr1G048950.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
2 Sobic.004G184500 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
3 Sobic.003G202900 expressed protein -
4 Sobic.003G155350 - -
5 Sobic.002G076932 - -
6 Sobic.009G170301 - -
7 Sobic.001G176800 - -
8 Sobic.008G166250 - -
9 Sobic.007G017300 endoglucanase, putative, expressed -
10 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
11 Sobic.001G468200 MT-A70 domain containing protein, expressed -
12 Sobic.001G212701 - -
13 Sobic.009G045100 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
14 Sobic.001G204200 acetyltransferase, GNAT family, putative, expressed -
15 Sobic.006G093400 potassium channel SKOR, putative, expressed -
16 Sobic.005G155001 - -
17 Sobic.002G018133 - -
18 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
19 Sobic.007G090406 - -
20 Sobic.002G138200 domain of unknown function DUF966 domain containing protein, expressed -


Gene co-expression network
sample Sobic005G094500 Sobic005G094500 Sobic002G395900 Sobic002G395900 Sobic005G094500--Sobic002G395900 Sobic004G184500 Sobic004G184500 Sobic005G094500--Sobic004G184500 Sobic003G202900 Sobic003G202900 Sobic005G094500--Sobic003G202900 Sobic003G155350 Sobic003G155350 Sobic005G094500--Sobic003G155350 Sobic002G076932 Sobic002G076932 Sobic005G094500--Sobic002G076932 Sobic009G170301 Sobic009G170301 Sobic005G094500--Sobic009G170301 Sobic001G176800 Sobic001G176800 Sobic005G094500--Sobic001G176800 Sobic008G166250 Sobic008G166250 Sobic005G094500--Sobic008G166250 Sobic007G017300 Sobic007G017300 Sobic005G094500--Sobic007G017300 Sobic009G045100 Sobic009G045100 Sobic002G395900--Sobic009G045100 Sobic002G395900--Sobic005G094500 Sobic002G395900--Sobic003G202900 Sobic002G395900--Sobic007G017300 Sobic001G368000 Sobic001G368000 Sobic002G395900--Sobic001G368000 Sobic002G395900--Sobic009G170301 Sobic001G468200 Sobic001G468200 Sobic002G395900--Sobic001G468200 Sobic002G395900--Sobic003G155350 Sobic002G395900--Sobic001G176800 Sobic004G184500--Sobic008G166250 Sobic004G184500--Sobic003G155350 Sobic004G184500--Sobic005G094500 Sobic004G184500--Sobic001G176800 Sobic001G212701 Sobic001G212701 Sobic004G184500--Sobic001G212701 Sobic002G114600 Sobic002G114600 Sobic004G184500--Sobic002G114600 Sobic004G184500--Sobic001G468200 Sobic004G184500--Sobic003G202900 Sobic004G314750 Sobic004G314750 Sobic004G184500--Sobic004G314750 Sobic003G202900--Sobic002G395900 Sobic003G202900--Sobic005G094500 Sobic003G202900--Sobic001G176800 Sobic003G202900--Sobic009G045100 Sobic003G202900--Sobic004G184500 Sobic003G202900--Sobic001G468200 Sobic003G202900--Sobic009G170301 Sobic003G202900--Sobic007G017300 Sobic003G202900--Sobic001G368000 Sobic003G155350--Sobic004G184500 Sobic003G155350--Sobic001G468200 Sobic003G155350--Sobic005G094500 Sobic003G155350--Sobic008G166250 Sobic003G155350--Sobic007G017300 Sobic002G018133 Sobic002G018133 Sobic003G155350--Sobic002G018133 Sobic002G346250 Sobic002G346250 Sobic003G155350--Sobic002G346250 Sobic003G155350--Sobic001G368000 Sobic003G155350--Sobic002G395900 Sobic002G076932--Sobic009G170301 Sobic002G076932--Sobic005G094500 Sobic001G204200 Sobic001G204200 Sobic002G076932--Sobic001G204200 Sobic008G054400 Sobic008G054400 Sobic002G076932--Sobic008G054400 Sobic010G041500 Sobic010G041500 Sobic002G076932--Sobic010G041500 Sobic002G076932--Sobic008G166250 Sobic002G076932--Sobic004G184500 Sobic002G076932--Sobic003G202900 Sobic002G076932--Sobic001G212701 Sobic009G170301--Sobic002G076932 Sobic009G170301--Sobic005G094500 Sobic009G170301--Sobic010G041500 Sobic009G170301--Sobic001G368000 Sobic009G170301--Sobic003G202900 Sobic009G170301--Sobic002G395900 Sobic009G170301--Sobic001G468200 Sobic001G490600 Sobic001G490600 Sobic009G170301--Sobic001G490600 Sobic009G170301--Sobic007G017300 Sobic001G176800--Sobic004G184500 Sobic001G176800--Sobic003G202900 Sobic008G192800 Sobic008G192800 Sobic001G176800--Sobic008G192800 Sobic001G176800--Sobic005G094500 Sobic001G176800--Sobic007G017300 Sobic001G176800--Sobic009G045100 Sobic007G090406 Sobic007G090406 Sobic001G176800--Sobic007G090406 Sobic001G176800--Sobic001G468200 Sobic005G001600 Sobic005G001600 Sobic001G176800--Sobic005G001600 Sobic008G166250--Sobic004G184500 Sobic008G166250--Sobic005G094500 Sobic008G166250--Sobic003G155350 Sobic008G166250--Sobic004G314750 Sobic008G166250--Sobic001G204200 Sobic008G166250--Sobic008G054400 Sobic008G166250--Sobic002G114600 Sobic008G166250--Sobic001G212701 Sobic009G094000 Sobic009G094000 Sobic008G166250--Sobic009G094000 Sobic007G017300--Sobic001G368000 Sobic001G483200 Sobic001G483200 Sobic007G017300--Sobic001G483200 Sobic009G004500 Sobic009G004500 Sobic007G017300--Sobic009G004500 Sobic005G155001 Sobic005G155001 Sobic007G017300--Sobic005G155001 Sobic007G061500 Sobic007G061500 Sobic007G017300--Sobic007G061500 Sobic003G093500 Sobic003G093500 Sobic007G017300--Sobic003G093500 Sobic007G213500 Sobic007G213500 Sobic007G017300--Sobic007G213500 Sobic001G028500 Sobic001G028500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200
Octagon: transcription factors


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