Gene annotation
Transcriptome id Sobic.009G045100.1
Synonym Sb09g003850
Functional annotation proline synthetase co-transcribed bacterial homolog protein, putative, expressed
UniProt C5Z044
Pfam PF01168
Panther DB PTHR10146 PTHR10146:SF6
NCBI CDD KOG3157; Proline synthetase co-transcribed protein
KEGG Orthology K06997; yggS, PLP dependent protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11930 : Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
RAP-DB (Rice) LOC_Os05g05740.1 : proline synthetase co-transcribed bacterial homolog protein, putative, expressed
MaizeGDB (Corn) Zm00025a038068 , Zm00025a025990
Brachypodium KQK11554 , PNT71815 , KQK07492
Barley -
Wheat TraesCS1D02G099200 , TraesCS1A02G090600 , TraesCS1B02G118400
Populus -


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cDNA sequences
Sobic.009G045100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
2 Sobic.003G093500 protein binding protein, putative, expressed -
3 Sobic.007G017300 endoglucanase, putative, expressed -
4 Sobic.003G202900 expressed protein -
5 Sobic.001G176800 - -
6 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
7 Sobic.005G094500 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
8 Sobic.004G047001 - -
9 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
10 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.004G231501 - -
12 Sobic.009G004500 expressed protein -
13 Sobic.001G341900 domain of unknown function domain containing protein, expressed -
14 Sobic.005G155001 - -
15 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
16 Sobic.002G282000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
17 Sobic.002G138200 domain of unknown function DUF966 domain containing protein, expressed -
18 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
19 Sobic.001G468200 MT-A70 domain containing protein, expressed -
20 Sobic.009G082500 - -


Gene co-expression network
sample Sobic009G045100 Sobic009G045100 Sobic002G395900 Sobic002G395900 Sobic009G045100--Sobic002G395900 Sobic003G093500 Sobic003G093500 Sobic009G045100--Sobic003G093500 Sobic007G017300 Sobic007G017300 Sobic009G045100--Sobic007G017300 Sobic003G202900 Sobic003G202900 Sobic009G045100--Sobic003G202900 Sobic001G176800 Sobic001G176800 Sobic009G045100--Sobic001G176800 Sobic007G061500 Sobic007G061500 Sobic009G045100--Sobic007G061500 Sobic005G094500 Sobic005G094500 Sobic009G045100--Sobic005G094500 Sobic004G047001 Sobic004G047001 Sobic009G045100--Sobic004G047001 Sobic001G368000 Sobic001G368000 Sobic009G045100--Sobic001G368000 Sobic002G395900--Sobic009G045100 Sobic002G395900--Sobic005G094500 Sobic002G395900--Sobic003G202900 Sobic002G395900--Sobic007G017300 Sobic002G395900--Sobic001G368000 Sobic009G170301 Sobic009G170301 Sobic002G395900--Sobic009G170301 Sobic001G468200 Sobic001G468200 Sobic002G395900--Sobic001G468200 Sobic003G155350 Sobic003G155350 Sobic002G395900--Sobic003G155350 Sobic002G395900--Sobic001G176800 Sobic009G004500 Sobic009G004500 Sobic003G093500--Sobic009G004500 Sobic003G093500--Sobic007G061500 Sobic003G093500--Sobic007G017300 Sobic001G341900 Sobic001G341900 Sobic003G093500--Sobic001G341900 Sobic008G192800 Sobic008G192800 Sobic003G093500--Sobic008G192800 Sobic003G093500--Sobic009G045100 Sobic005G155001 Sobic005G155001 Sobic003G093500--Sobic005G155001 Sobic004G224100 Sobic004G224100 Sobic003G093500--Sobic004G224100 Sobic001G060200 Sobic001G060200 Sobic003G093500--Sobic001G060200 Sobic007G017300--Sobic001G368000 Sobic001G483200 Sobic001G483200 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G213500 Sobic007G213500 Sobic007G017300--Sobic007G213500 Sobic001G028500 Sobic001G028500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic003G202900--Sobic002G395900 Sobic003G202900--Sobic005G094500 Sobic003G202900--Sobic001G176800 Sobic003G202900--Sobic009G045100 Sobic004G184500 Sobic004G184500 Sobic003G202900--Sobic004G184500 Sobic003G202900--Sobic001G468200 Sobic003G202900--Sobic009G170301 Sobic003G202900--Sobic007G017300 Sobic003G202900--Sobic001G368000 Sobic001G176800--Sobic004G184500 Sobic001G176800--Sobic003G202900 Sobic001G176800--Sobic008G192800 Sobic001G176800--Sobic005G094500 Sobic001G176800--Sobic007G017300 Sobic001G176800--Sobic009G045100 Sobic007G090406 Sobic007G090406 Sobic001G176800--Sobic007G090406 Sobic001G176800--Sobic001G468200 Sobic005G001600 Sobic005G001600 Sobic001G176800--Sobic005G001600 Sobic004G231501 Sobic004G231501 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic004G314100 Sobic004G314100 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic003G106100 Sobic003G106100 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic005G094500--Sobic002G395900 Sobic005G094500--Sobic004G184500 Sobic005G094500--Sobic003G202900 Sobic005G094500--Sobic003G155350 Sobic002G076932 Sobic002G076932 Sobic005G094500--Sobic002G076932 Sobic005G094500--Sobic009G170301 Sobic005G094500--Sobic001G176800 Sobic008G166250 Sobic008G166250 Sobic005G094500--Sobic008G166250 Sobic005G094500--Sobic007G017300 Sobic003G043650 Sobic003G043650 Sobic004G047001--Sobic003G043650 Sobic004G047001--Sobic009G045100 Sobic002G138200 Sobic002G138200 Sobic004G047001--Sobic002G138200 Sobic004G047001--Sobic003G093500 Sobic004G047001--Sobic004G224100 Sobic004G200000 Sobic004G200000 Sobic004G047001--Sobic004G200000 Sobic004G047001--Sobic001G341900 Sobic010G009532 Sobic010G009532 Sobic004G047001--Sobic010G009532 Sobic005G096201 Sobic005G096201 Sobic004G047001--Sobic005G096201 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500
Octagon: transcription factors


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