Gene annotation
Transcriptome id Sobic.001G341900.2,Sobic.001G341900.3,Sobic.001G341900.1,Sobic.001G341900.4
Synonym Sb01g032850
Functional annotation domain of unknown function domain containing protein, expressed
UniProt A0A1Z5S918 , C5WWP4 , A0A1Z5S921 , A0A1Z5S905
Pfam PF03619
Panther DB PTHR23423 PTHR23423:SF10
NCBI CDD KOG2641; Predicted seven transmembrane receptor - rhodopsin family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G23070 : Protein of unknown function (DUF300)
RAP-DB (Rice) LOC_Os03g29340.1 : domain of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002803 , Zm00025a003121
Brachypodium KQK21329
Barley HORVU6Hr1G085760.21 , HORVU6Hr1G085760.20 , HORVU6Hr1G085760.23 , HORVU6Hr1G085760.22 , HORVU6Hr1G085760.25 , HORVU6Hr1G085760.24 , HORVU6Hr1G085760.27 , HORVU6Hr1G085760.26 , HORVU6Hr1G085760.28 , HORVU6Hr1G085760.1 , HORVU4Hr1G047790.9 , HORVU6Hr1G085760.6 , HORVU4Hr1G047790.8 , HORVU4Hr1G047790.7 , HORVU4Hr1G047790.6 , HORVU4Hr1G047790.5 , HORVU4Hr1G047790.4 , HORVU4Hr1G047790.3 , HORVU4Hr1G047790.2 , HORVU4Hr1G047790.1 , HORVU6Hr1G085760.9 , HORVU4Hr1G047790.10 , HORVU6Hr1G085760.7 , HORVU6Hr1G085760.4 , HORVU6Hr1G085760.5 , HORVU6Hr1G085760.2 , HORVU6Hr1G085760.3 , HORVU6Hr1G085760.18 , HORVU6Hr1G085760.19 , HORVU6Hr1G085760.14 , HORVU6Hr1G085760.15 , HORVU6Hr1G085760.16 , HORVU6Hr1G085760.17 , HORVU6Hr1G085760.10 , HORVU6Hr1G085760.11 , HORVU6Hr1G085760.12 , HORVU4Hr1G047790.15 , HORVU4Hr1G047790.14 , HORVU4Hr1G047790.13 , HORVU4Hr1G047790.12 , HORVU4Hr1G047790.11 , HORVU6Hr1G085760.8
Wheat TraesCS6D02G342800 , TraesCS4A02G157600 , TraesCS4A02G157600 , TraesCS6B02G392700 , TraesCS4B02G155300 , TraesCS4B02G155300 , TraesCS4D02G168300 , TraesCS6A02G359900 , TraesCS4D02G168300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093500 protein binding protein, putative, expressed -
2 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
3 Sobic.009G004500 expressed protein -
4 Sobic.004G224100 RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
5 Sobic.004G337700 expressed protein -
6 Sobic.008G192800 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
7 Sobic.009G045100 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
8 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
9 Sobic.009G114900 - -
10 Sobic.007G017300 endoglucanase, putative, expressed -
11 Sobic.004G047001 - -
12 Sobic.003G139100 - -
13 Sobic.001G028500 expressed protein -
14 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
15 Sobic.004G231501 - -
16 Sobic.001G494400 DUF593 domain containing protein, expressed -
17 Sobic.005G155001 - -
18 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
19 Sobic.001G312801 - -
20 Sobic.008G185000 - -


Gene co-expression network
sample Sobic001G341900 Sobic001G341900 Sobic003G093500 Sobic003G093500 Sobic001G341900--Sobic003G093500 Sobic007G061500 Sobic007G061500 Sobic001G341900--Sobic007G061500 Sobic009G004500 Sobic009G004500 Sobic001G341900--Sobic009G004500 Sobic004G224100 Sobic004G224100 Sobic001G341900--Sobic004G224100 Sobic004G337700 Sobic004G337700 Sobic001G341900--Sobic004G337700 Sobic008G192800 Sobic008G192800 Sobic001G341900--Sobic008G192800 Sobic009G045100 Sobic009G045100 Sobic001G341900--Sobic009G045100 Sobic001G368000 Sobic001G368000 Sobic001G341900--Sobic001G368000 Sobic009G114900 Sobic009G114900 Sobic001G341900--Sobic009G114900 Sobic003G093500--Sobic009G004500 Sobic003G093500--Sobic007G061500 Sobic007G017300 Sobic007G017300 Sobic003G093500--Sobic007G017300 Sobic003G093500--Sobic001G341900 Sobic003G093500--Sobic008G192800 Sobic003G093500--Sobic009G045100 Sobic005G155001 Sobic005G155001 Sobic003G093500--Sobic005G155001 Sobic003G093500--Sobic004G224100 Sobic001G060200 Sobic001G060200 Sobic003G093500--Sobic001G060200 Sobic004G231501 Sobic004G231501 Sobic007G061500--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic007G061500--Sobic001G028500 Sobic004G314100 Sobic004G314100 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic003G106100 Sobic003G106100 Sobic007G061500--Sobic003G106100 Sobic001G483200 Sobic001G483200 Sobic007G061500--Sobic001G483200 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic010G021401 Sobic010G021401 Sobic009G004500--Sobic010G021401 Sobic009G004500--Sobic001G060200 Sobic005G096201 Sobic005G096201 Sobic004G224100--Sobic005G096201 Sobic002G013600 Sobic002G013600 Sobic004G224100--Sobic002G013600 Sobic004G224100--Sobic003G093500 Sobic003G139100 Sobic003G139100 Sobic004G224100--Sobic003G139100 Sobic004G224100--Sobic001G341900 Sobic004G224100--Sobic001G060200 Sobic004G047001 Sobic004G047001 Sobic004G224100--Sobic004G047001 Sobic004G224100--Sobic008G192800 Sobic004G224100--Sobic007G061500 Sobic004G337700--Sobic003G093500 Sobic004G337700--Sobic001G341900 Sobic002G006001 Sobic002G006001 Sobic004G337700--Sobic002G006001 Sobic004G337700--Sobic003G106100 Sobic004G337700--Sobic004G314100 Sobic001G191400 Sobic001G191400 Sobic004G337700--Sobic001G191400 Sobic004G337700--Sobic001G060200 Sobic004G337700--Sobic005G155001 Sobic004G337700--Sobic007G061500 Sobic007G090406 Sobic007G090406 Sobic008G192800--Sobic007G090406 Sobic008G192800--Sobic009G004500 Sobic008G192800--Sobic003G093500 Sobic001G176800 Sobic001G176800 Sobic008G192800--Sobic001G176800 Sobic008G192800--Sobic009G114900 Sobic008G192800--Sobic005G155001 Sobic008G192800--Sobic007G017300 Sobic008G192800--Sobic007G061500 Sobic008G192800--Sobic001G368000 Sobic002G395900 Sobic002G395900 Sobic009G045100--Sobic002G395900 Sobic009G045100--Sobic003G093500 Sobic009G045100--Sobic007G017300 Sobic003G202900 Sobic003G202900 Sobic009G045100--Sobic003G202900 Sobic009G045100--Sobic001G176800 Sobic009G045100--Sobic007G061500 Sobic005G094500 Sobic005G094500 Sobic009G045100--Sobic005G094500 Sobic009G045100--Sobic004G047001 Sobic009G045100--Sobic001G368000 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G468200 Sobic001G468200 Sobic001G368000--Sobic001G468200 Sobic007G213500 Sobic007G213500 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500 Sobic009G114900--Sobic005G155001 Sobic009G114900--Sobic010G021401 Sobic009G114900--Sobic007G090406 Sobic002G252700 Sobic002G252700 Sobic009G114900--Sobic002G252700 Sobic009G114900--Sobic009G004500 Sobic006G093400 Sobic006G093400 Sobic009G114900--Sobic006G093400 Sobic009G114900--Sobic008G192800 Sobic001G527900 Sobic001G527900 Sobic009G114900--Sobic001G527900 Sobic009G114900--Sobic001G483200
Octagon: transcription factors


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