Gene annotation
Transcriptome id Sobic.004G337700.1
Synonym Sb04g036530
Functional annotation expressed protein
UniProt C5XV63
Pfam -
Panther DB PTHR33604 PTHR33604:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G60700 : glycosyltransferase family protein 2
RAP-DB (Rice) LOC_Os02g56260.1 : expressed protein
MaizeGDB (Corn) Zm00025a022529
Brachypodium PNT69401 , KQK01256
Barley HORVU6Hr1G088380.2 , HORVU6Hr1G088380.1
Wheat TraesCS6B02G412600 , TraesCS6A02G375000 , TraesCS6D02G359200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093500 protein binding protein, putative, expressed -
2 Sobic.001G341900 domain of unknown function domain containing protein, expressed -
3 Sobic.002G006001 - -
4 Sobic.003G106100 expressed protein -
5 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
6 Sobic.001G191400 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
7 Sobic.001G060200 - -
8 Sobic.005G155001 - -
9 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
10 Sobic.003G416900 esterase, putative, expressed -
11 Sobic.004G224100 RPA2B - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
12 Sobic.009G004500 expressed protein -
13 Sobic.001G028500 expressed protein -
14 Sobic.009G114900 - -
15 Sobic.007G017300 endoglucanase, putative, expressed -
16 Sobic.010G220100 cell cycle control protein, putative, expressed -
17 Sobic.003G139100 - -
18 Sobic.003G030200 phosphopantothenoylcysteine decarboxylase, putative, expressed K01598: PPCDC, phosphopantothenoylcysteine decarboxylase
19 Sobic.010G021401 - -
20 Sobic.009G045100 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein


Gene co-expression network
sample Sobic004G337700 Sobic004G337700 Sobic003G093500 Sobic003G093500 Sobic004G337700--Sobic003G093500 Sobic001G341900 Sobic001G341900 Sobic004G337700--Sobic001G341900 Sobic002G006001 Sobic002G006001 Sobic004G337700--Sobic002G006001 Sobic003G106100 Sobic003G106100 Sobic004G337700--Sobic003G106100 Sobic004G314100 Sobic004G314100 Sobic004G337700--Sobic004G314100 Sobic001G191400 Sobic001G191400 Sobic004G337700--Sobic001G191400 Sobic001G060200 Sobic001G060200 Sobic004G337700--Sobic001G060200 Sobic005G155001 Sobic005G155001 Sobic004G337700--Sobic005G155001 Sobic007G061500 Sobic007G061500 Sobic004G337700--Sobic007G061500 Sobic009G004500 Sobic009G004500 Sobic003G093500--Sobic009G004500 Sobic003G093500--Sobic007G061500 Sobic007G017300 Sobic007G017300 Sobic003G093500--Sobic007G017300 Sobic003G093500--Sobic001G341900 Sobic008G192800 Sobic008G192800 Sobic003G093500--Sobic008G192800 Sobic009G045100 Sobic009G045100 Sobic003G093500--Sobic009G045100 Sobic003G093500--Sobic005G155001 Sobic004G224100 Sobic004G224100 Sobic003G093500--Sobic004G224100 Sobic003G093500--Sobic001G060200 Sobic001G341900--Sobic003G093500 Sobic001G341900--Sobic007G061500 Sobic001G341900--Sobic009G004500 Sobic001G341900--Sobic004G224100 Sobic001G341900--Sobic004G337700 Sobic001G341900--Sobic008G192800 Sobic001G341900--Sobic009G045100 Sobic001G368000 Sobic001G368000 Sobic001G341900--Sobic001G368000 Sobic009G114900 Sobic009G114900 Sobic001G341900--Sobic009G114900 Sobic003G416900 Sobic003G416900 Sobic002G006001--Sobic003G416900 Sobic002G006001--Sobic004G337700 Sobic009G076000 Sobic009G076000 Sobic002G006001--Sobic009G076000 Sobic009G205900 Sobic009G205900 Sobic002G006001--Sobic009G205900 Sobic010G043700 Sobic010G043700 Sobic002G006001--Sobic010G043700 Sobic001G288200 Sobic001G288200 Sobic002G006001--Sobic001G288200 Sobic002G006001--Sobic001G341900 Sobic002G006001--Sobic003G093500 Sobic002G006001--Sobic004G224100 Sobic003G106100--Sobic004G314100 Sobic001G028500 Sobic001G028500 Sobic003G106100--Sobic001G028500 Sobic004G231501 Sobic004G231501 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic003G106100--Sobic001G104100 Sobic007G213500 Sobic007G213500 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic003G106100--Sobic001G060200 Sobic004G026000 Sobic004G026000 Sobic003G106100--Sobic004G026000 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300 Sobic001G191400--Sobic004G337700 Sobic007G090406 Sobic007G090406 Sobic001G191400--Sobic007G090406 Sobic001G191400--Sobic005G155001 Sobic001G191400--Sobic009G114900 Sobic010G021401 Sobic010G021401 Sobic001G191400--Sobic010G021401 Sobic003G030200 Sobic003G030200 Sobic001G191400--Sobic003G030200 Sobic005G204900 Sobic005G204900 Sobic001G191400--Sobic005G204900 Sobic001G191400--Sobic001G341900 Sobic001G490600 Sobic001G490600 Sobic001G191400--Sobic001G490600 Sobic001G060200--Sobic009G004500 Sobic001G060200--Sobic001G028500 Sobic001G060200--Sobic003G093500 Sobic001G060200--Sobic007G061500 Sobic001G060200--Sobic005G155001 Sobic001G060200--Sobic003G106100 Sobic001G527900 Sobic001G527900 Sobic001G060200--Sobic001G527900 Sobic001G060200--Sobic007G017300 Sobic001G060200--Sobic004G224100 Sobic001G483200 Sobic001G483200 Sobic005G155001--Sobic001G483200 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic005G155001--Sobic001G527900 Sobic005G155001--Sobic001G368000 Sobic008G185000 Sobic008G185000 Sobic005G155001--Sobic008G185000 Sobic005G155001--Sobic007G090406 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200
Octagon: transcription factors


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