Gene annotation
Transcriptome id Sobic.003G106100.1,Sobic.003G106100.2
Synonym Sb03g008910
Functional annotation expressed protein
UniProt A0A1B6Q2I9 , A0A1W0VWQ3
Pfam -
Panther DB PTHR38390
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07380 : -
RAP-DB (Rice) LOC_Os01g01400.1 : expressed protein
MaizeGDB (Corn) Zm00025a035395
Brachypodium KQK02757 , KQK02756
Barley HORVU3Hr1G014240.14 , HORVU3Hr1G014240.15 , HORVU3Hr1G014240.10 , HORVU3Hr1G014240.11 , HORVU3Hr1G014240.12 , HORVU3Hr1G014240.13 , HORVU3Hr1G014240.8 , HORVU3Hr1G014240.9 , HORVU3Hr1G014240.6 , HORVU3Hr1G014240.7 , HORVU3Hr1G014240.4 , HORVU3Hr1G014240.5 , HORVU3Hr1G014240.2 , HORVU3Hr1G014240.1
Wheat TraesCS3B02G093900 , TraesCS3A02G078800 , TraesCS3D02G079300 , TraesCS3D02G079300 , TraesCS3D02G079300 , TraesCS3A02G078800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
2 Sobic.001G028500 expressed protein -
3 Sobic.004G231501 - -
4 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
5 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
6 Sobic.007G213500 expressed protein -
7 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
8 Sobic.001G060200 - -
9 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
10 Sobic.007G017300 endoglucanase, putative, expressed -
11 Sobic.009G004500 expressed protein -
12 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
13 Sobic.005G155001 - -
14 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
15 Sobic.003G093500 protein binding protein, putative, expressed -
16 Sobic.004G337700 expressed protein -
17 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
18 Sobic.001G527900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
19 Sobic.004G202750 - -
20 Sobic.004G350600 AMP-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G106100 Sobic003G106100 Sobic004G314100 Sobic004G314100 Sobic003G106100--Sobic004G314100 Sobic001G028500 Sobic001G028500 Sobic003G106100--Sobic001G028500 Sobic004G231501 Sobic004G231501 Sobic003G106100--Sobic004G231501 Sobic007G061500 Sobic007G061500 Sobic003G106100--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic003G106100--Sobic001G104100 Sobic007G213500 Sobic007G213500 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic001G060200 Sobic001G060200 Sobic003G106100--Sobic001G060200 Sobic004G026000 Sobic004G026000 Sobic003G106100--Sobic004G026000 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic007G017300 Sobic007G017300 Sobic004G314100--Sobic007G017300 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic009G004500 Sobic009G004500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic001G028500--Sobic001G483200 Sobic001G028500--Sobic001G060200 Sobic004G231501--Sobic001G028500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic004G231501--Sobic003G106100 Sobic004G231501--Sobic009G004500 Sobic004G231501--Sobic007G017300 Sobic004G231501--Sobic004G202750 Sobic004G231501--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic004G231501--Sobic001G368000 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic003G093500 Sobic003G093500 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic001G104100--Sobic003G106100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic003G118500 Sobic003G118500 Sobic001G104100--Sobic003G118500 Sobic002G320700 Sobic002G320700 Sobic001G104100--Sobic002G320700 Sobic002G399000 Sobic002G399000 Sobic001G104100--Sobic002G399000 Sobic001G104100--Sobic007G213500 Sobic007G213500--Sobic004G026000 Sobic006G121200 Sobic006G121200 Sobic007G213500--Sobic006G121200 Sobic007G213500--Sobic004G314100 Sobic007G213500--Sobic007G017300 Sobic007G213500--Sobic001G483200 Sobic007G213500--Sobic001G368000 Sobic007G213500--Sobic003G106100 Sobic007G213500--Sobic007G061500 Sobic007G213500--Sobic001G104100 Sobic009G199900--Sobic001G104100 Sobic009G199900--Sobic001G028500 Sobic009G199900--Sobic003G106100 Sobic009G199900--Sobic004G202750 Sobic004G350600 Sobic004G350600 Sobic009G199900--Sobic004G350600 Sobic009G199900--Sobic004G231501 Sobic009G199900--Sobic004G026000 Sobic003G155800 Sobic003G155800 Sobic009G199900--Sobic003G155800 Sobic009G199900--Sobic004G314100 Sobic001G060200--Sobic009G004500 Sobic001G060200--Sobic001G028500 Sobic001G060200--Sobic003G093500 Sobic001G060200--Sobic007G061500 Sobic005G155001 Sobic005G155001 Sobic001G060200--Sobic005G155001 Sobic001G060200--Sobic003G106100 Sobic001G527900 Sobic001G527900 Sobic001G060200--Sobic001G527900 Sobic001G060200--Sobic007G017300 Sobic004G224100 Sobic004G224100 Sobic001G060200--Sobic004G224100 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic004G026000--Sobic001G104100 Sobic001G096200 Sobic001G096200 Sobic004G026000--Sobic001G096200 Sobic004G026000--Sobic006G121200 Sobic004G026000--Sobic003G106100 Sobic004G026000--Sobic004G231501 Sobic004G026000--Sobic001G028500
Octagon: transcription factors


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