Gene annotation
Transcriptome id Sobic.004G231501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RNS6
Pfam -
Panther DB PTHR31060 PTHR31060:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64230 : -
RAP-DB (Rice) LOC_Os02g51820.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK01837
Barley HORVU6Hr1G078210.23 , HORVU6Hr1G078210.22 , HORVU6Hr1G078210.24
Wheat TraesCS6A02G318700 , TraesCS6D02G297900 , TraesCS6B02G348900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G028500 expressed protein -
2 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
3 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
4 Sobic.003G106100 expressed protein -
5 Sobic.009G004500 expressed protein -
6 Sobic.007G017300 endoglucanase, putative, expressed -
7 Sobic.004G202750 - -
8 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
9 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
10 Sobic.001G071700 protein kinase family protein, putative, expressed -
11 Sobic.007G213500 expressed protein -
12 Sobic.003G093500 protein binding protein, putative, expressed -
13 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
14 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
15 Sobic.009G045100 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
16 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
17 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
18 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
19 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
20 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T


Gene co-expression network
sample Sobic004G231501 Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic004G231501--Sobic001G028500 Sobic007G061500 Sobic007G061500 Sobic004G231501--Sobic007G061500 Sobic004G314100 Sobic004G314100 Sobic004G231501--Sobic004G314100 Sobic003G106100 Sobic003G106100 Sobic004G231501--Sobic003G106100 Sobic009G004500 Sobic009G004500 Sobic004G231501--Sobic009G004500 Sobic007G017300 Sobic007G017300 Sobic004G231501--Sobic007G017300 Sobic004G202750 Sobic004G202750 Sobic004G231501--Sobic004G202750 Sobic001G483200 Sobic001G483200 Sobic004G231501--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic004G231501--Sobic001G368000 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G060200 Sobic001G060200 Sobic001G028500--Sobic001G060200 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic003G093500 Sobic003G093500 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G026000 Sobic004G026000 Sobic004G314100--Sobic004G026000 Sobic007G213500 Sobic007G213500 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic001G104100 Sobic001G104100 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic003G106100--Sobic001G104100 Sobic003G106100--Sobic007G213500 Sobic009G199900 Sobic009G199900 Sobic003G106100--Sobic009G199900 Sobic003G106100--Sobic001G060200 Sobic003G106100--Sobic004G026000 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic010G021401 Sobic010G021401 Sobic009G004500--Sobic010G021401 Sobic009G004500--Sobic001G060200 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic007G017300--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic007G017300--Sobic001G468200 Sobic004G202750--Sobic001G028500 Sobic001G350800 Sobic001G350800 Sobic004G202750--Sobic001G350800 Sobic002G320700 Sobic002G320700 Sobic004G202750--Sobic002G320700 Sobic004G202750--Sobic009G004500 Sobic004G202750--Sobic004G231501 Sobic001G071700 Sobic001G071700 Sobic004G202750--Sobic001G071700 Sobic004G202750--Sobic007G061500 Sobic004G202750--Sobic001G104100 Sobic004G202750--Sobic001G483200 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic001G483200--Sobic007G061500 Sobic001G483200--Sobic007G213500 Sobic001G527900 Sobic001G527900 Sobic001G483200--Sobic001G527900 Sobic001G483200--Sobic001G028500 Sobic001G483200--Sobic001G468200 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G368000--Sobic001G468200 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500
Octagon: transcription factors


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