Gene annotation
Transcriptome id Sobic.009G199900.1
Synonym FT
Functional annotation osFTL10 FT-Like10 homologous to Flowering Locus T gene
contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
UniProt A0A1B6P9E3
Pfam PF01161
Panther DB PTHR11362 PTHR11362:SF30
NCBI CDD KOG3346; Phosphatidylethanolamine binding protein
KEGG Orthology K16223; protein FLOWERING LOCUS T
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65480 : PEBP (phosphatidylethanolamine-binding protein) family protein
RAP-DB (Rice) LOC_Os05g44180.1 : osFTL10 FT-Like10 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
MaizeGDB (Corn) Zm00025a044242 , Zm00025a037953
Brachypodium PNT72858 , PNT72857 , KQK05366 , KQK09728
Barley HORVU1Hr1G076430.3 , HORVU1Hr1G076430.2 , HORVU1Hr1G076430.1 , HORVU4Hr1G090390.3 , HORVU4Hr1G090390.2 , HORVU4Hr1G090390.1
Wheat TraesCSU02G130900 , TraesCS1B02G351100 , TraesCS1A02G338600 , TraesCS5A02G546900 , TraesCSU02G130700 , TraesCSU02G130800 , TraesCS4B02G379100 , TraesCS4B02G380600 , TraesCS1D02G340800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
2 Sobic.001G028500 expressed protein -
3 Sobic.003G106100 expressed protein -
4 Sobic.004G202750 - -
5 Sobic.004G350600 AMP-binding domain containing protein, expressed -
6 Sobic.004G231501 - -
7 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
8 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
9 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
10 Sobic.007G213500 expressed protein -
11 Sobic.003G251900 expressed protein -
12 Sobic.002G320700 expressed protein -
13 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
14 Sobic.002G399000 expressed protein -
15 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
16 Sobic.006G169600 expressed protein -
17 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
18 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
20 Sobic.001G350800 - -


Gene co-expression network
sample Sobic009G199900 Sobic009G199900 Sobic001G104100 Sobic001G104100 Sobic009G199900--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic009G199900--Sobic001G028500 Sobic003G106100 Sobic003G106100 Sobic009G199900--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic009G199900--Sobic004G202750 Sobic004G350600 Sobic004G350600 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic004G026000 Sobic004G026000 Sobic009G199900--Sobic004G026000 Sobic003G155800 Sobic003G155800 Sobic009G199900--Sobic003G155800 Sobic004G314100 Sobic004G314100 Sobic009G199900--Sobic004G314100 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic001G104100--Sobic003G106100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic003G118500 Sobic003G118500 Sobic001G104100--Sobic003G118500 Sobic002G320700 Sobic002G320700 Sobic001G104100--Sobic002G320700 Sobic002G399000 Sobic002G399000 Sobic001G104100--Sobic002G399000 Sobic007G213500 Sobic007G213500 Sobic001G104100--Sobic007G213500 Sobic001G028500--Sobic004G231501 Sobic007G061500 Sobic007G061500 Sobic001G028500--Sobic007G061500 Sobic009G004500 Sobic009G004500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic001G028500--Sobic007G017300 Sobic001G483200 Sobic001G483200 Sobic001G028500--Sobic001G483200 Sobic001G060200 Sobic001G060200 Sobic001G028500--Sobic001G060200 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic003G106100--Sobic001G104100 Sobic003G106100--Sobic007G213500 Sobic003G106100--Sobic009G199900 Sobic003G106100--Sobic001G060200 Sobic003G106100--Sobic004G026000 Sobic004G202750--Sobic001G028500 Sobic001G350800 Sobic001G350800 Sobic004G202750--Sobic001G350800 Sobic004G202750--Sobic002G320700 Sobic004G202750--Sobic009G004500 Sobic004G202750--Sobic004G231501 Sobic001G071700 Sobic001G071700 Sobic004G202750--Sobic001G071700 Sobic004G202750--Sobic007G061500 Sobic004G202750--Sobic001G104100 Sobic004G202750--Sobic001G483200 Sobic001G350300 Sobic001G350300 Sobic004G350600--Sobic001G350300 Sobic004G350600--Sobic002G399000 Sobic004G350600--Sobic001G104100 Sobic004G350600--Sobic001G028500 Sobic006G170800 Sobic006G170800 Sobic004G350600--Sobic006G170800 Sobic004G350600--Sobic009G199900 Sobic004G305300 Sobic004G305300 Sobic004G350600--Sobic004G305300 Sobic004G350600--Sobic002G320700 Sobic004G350600--Sobic003G118500 Sobic004G231501--Sobic001G028500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic004G231501--Sobic003G106100 Sobic004G231501--Sobic009G004500 Sobic004G231501--Sobic007G017300 Sobic004G231501--Sobic004G202750 Sobic004G231501--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic004G231501--Sobic001G368000 Sobic004G310400 Sobic004G310400 Sobic004G026000--Sobic004G310400 Sobic004G026000--Sobic007G213500 Sobic004G026000--Sobic004G314100 Sobic004G026000--Sobic001G104100 Sobic001G096200 Sobic001G096200 Sobic004G026000--Sobic001G096200 Sobic006G121200 Sobic006G121200 Sobic004G026000--Sobic006G121200 Sobic004G026000--Sobic003G106100 Sobic004G026000--Sobic004G231501 Sobic004G026000--Sobic001G028500 Sobic003G362800 Sobic003G362800 Sobic003G155800--Sobic003G362800 Sobic004G181000 Sobic004G181000 Sobic003G155800--Sobic004G181000 Sobic003G253700 Sobic003G253700 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic009G223900 Sobic009G223900 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic002G001500 Sobic002G001500 Sobic003G155800--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.