Gene annotation
Transcriptome id Sobic.001G350800.3,Sobic.001G350800.2
Synonym
Functional annotation -
UniProt A0A1B6QMT1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G071700 protein kinase family protein, putative, expressed -
2 Sobic.004G202750 - -
3 Sobic.001G028500 expressed protein -
4 Sobic.004G190800 galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
5 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
6 Sobic.004G231501 - -
7 Sobic.010G261500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
8 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
9 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
10 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
11 Sobic.002G320700 expressed protein -
12 Sobic.004G144300 - -
13 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.005G014400 esterase, putative, expressed -
15 Sobic.002G360701 - -
16 Sobic.002G013600 expressed protein -
17 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
19 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
20 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126


Gene co-expression network
sample Sobic001G350800 Sobic001G350800 Sobic001G071700 Sobic001G071700 Sobic001G350800--Sobic001G071700 Sobic004G202750 Sobic004G202750 Sobic001G350800--Sobic004G202750 Sobic001G028500 Sobic001G028500 Sobic001G350800--Sobic001G028500 Sobic004G190800 Sobic004G190800 Sobic001G350800--Sobic004G190800 Sobic007G061500 Sobic007G061500 Sobic001G350800--Sobic007G061500 Sobic004G231501 Sobic004G231501 Sobic001G350800--Sobic004G231501 Sobic010G261500 Sobic010G261500 Sobic001G350800--Sobic010G261500 Sobic004G314100 Sobic004G314100 Sobic001G350800--Sobic004G314100 Sobic001G104100 Sobic001G104100 Sobic001G350800--Sobic001G104100 Sobic001G071700--Sobic001G350800 Sobic001G071700--Sobic004G202750 Sobic001G071700--Sobic004G231501 Sobic001G033200 Sobic001G033200 Sobic001G071700--Sobic001G033200 Sobic001G071700--Sobic007G061500 Sobic001G071700--Sobic001G028500 Sobic006G121200 Sobic006G121200 Sobic001G071700--Sobic006G121200 Sobic002G320700 Sobic002G320700 Sobic001G071700--Sobic002G320700 Sobic001G071700--Sobic004G314100 Sobic004G202750--Sobic001G028500 Sobic004G202750--Sobic001G350800 Sobic004G202750--Sobic002G320700 Sobic009G004500 Sobic009G004500 Sobic004G202750--Sobic009G004500 Sobic004G202750--Sobic004G231501 Sobic004G202750--Sobic001G071700 Sobic004G202750--Sobic007G061500 Sobic004G202750--Sobic001G104100 Sobic001G483200 Sobic001G483200 Sobic004G202750--Sobic001G483200 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic003G106100 Sobic003G106100 Sobic001G028500--Sobic003G106100 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic007G017300 Sobic007G017300 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G060200 Sobic001G060200 Sobic001G028500--Sobic001G060200 Sobic002G013600 Sobic002G013600 Sobic004G190800--Sobic002G013600 Sobic001G312801 Sobic001G312801 Sobic004G190800--Sobic001G312801 Sobic009G049100 Sobic009G049100 Sobic004G190800--Sobic009G049100 Sobic002G360701 Sobic002G360701 Sobic004G190800--Sobic002G360701 Sobic004G190800--Sobic007G061500 Sobic004G190800--Sobic001G350800 Sobic004G190800--Sobic004G314100 Sobic004G288900 Sobic004G288900 Sobic004G190800--Sobic004G288900 Sobic002G346250 Sobic002G346250 Sobic004G190800--Sobic002G346250 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic001G368000 Sobic001G368000 Sobic007G061500--Sobic001G368000 Sobic003G093500 Sobic003G093500 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic004G231501--Sobic001G028500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic004G231501--Sobic003G106100 Sobic004G231501--Sobic009G004500 Sobic004G231501--Sobic007G017300 Sobic004G231501--Sobic004G202750 Sobic004G231501--Sobic001G483200 Sobic004G231501--Sobic001G368000 Sobic009G252500 Sobic009G252500 Sobic010G261500--Sobic009G252500 Sobic007G046600 Sobic007G046600 Sobic010G261500--Sobic007G046600 Sobic010G261500--Sobic001G350800 Sobic009G252600 Sobic009G252600 Sobic010G261500--Sobic009G252600 Sobic010G261500--Sobic004G314100 Sobic010G261500--Sobic004G190800 Sobic004G053600 Sobic004G053600 Sobic010G261500--Sobic004G053600 Sobic001G010900 Sobic001G010900 Sobic010G261500--Sobic001G010900 Sobic003G298000 Sobic003G298000 Sobic010G261500--Sobic003G298000 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G026000 Sobic004G026000 Sobic004G314100--Sobic004G026000 Sobic007G213500 Sobic007G213500 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300 Sobic009G199900 Sobic009G199900 Sobic001G104100--Sobic009G199900 Sobic001G104100--Sobic004G026000 Sobic001G104100--Sobic003G106100 Sobic001G104100--Sobic004G314100 Sobic001G104100--Sobic001G028500 Sobic003G118500 Sobic003G118500 Sobic001G104100--Sobic003G118500 Sobic001G104100--Sobic002G320700 Sobic002G399000 Sobic002G399000 Sobic001G104100--Sobic002G399000 Sobic001G104100--Sobic007G213500
Octagon: transcription factors


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