Gene annotation
Transcriptome id Sobic.005G025400.1
Synonym CPK17, Sb05g002110
Functional annotation CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5Y427
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF130
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G12180 : calcium-dependent protein kinase 17
RAP-DB (Rice) LOC_Os11g04170.1 : CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a027150 , Zm00025a041347 , Zm00025a025734 , Zm00025a033981 , Zm00025a033401 , Zm00025a012860 , Zm00025a037842 , Zm00025a032700 , Zm00025a054043 , Zm00025a013124
Brachypodium KQK12836 , KQJ92400 , KQJ89539 , KQK10184 , PNT73998 , PNT73999
Barley HORVU3Hr1G079040.5 , HORVU3Hr1G079040.4 , HORVU3Hr1G079040.7 , HORVU3Hr1G079040.6 , HORVU3Hr1G079040.1 , HORVU3Hr1G079040.3 , HORVU3Hr1G079040.2 , HORVU4Hr1G026640.1 , HORVU4Hr1G026640.4 , HORVU4Hr1G026640.5 , HORVU6Hr1G094990.7 , HORVU6Hr1G094990.5 , HORVU6Hr1G094990.8 , HORVU0Hr1G032220.3 , HORVU0Hr1G032220.2 , HORVU0Hr1G032220.1 , HORVU1Hr1G068240.3 , HORVU1Hr1G068240.2 , HORVU1Hr1G068240.1 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.2 , HORVU6Hr1G094990.1 , HORVU5Hr1G044550.1 , HORVU5Hr1G044550.3 , HORVU5Hr1G044550.2
Wheat TraesCS1B02G320400 , TraesCS5D02G153800 , TraesCS5D02G434500 , TraesCS1A02G424200 , TraesCS4A02G187900 , TraesCS4D02G125500 , TraesCS3A02G334200 , TraesCS2D02G456400 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5D02G434500 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCS5B02G137600 , TraesCS3B02G365200 , TraesCS5D02G122800 , TraesCS6A02G261200 , TraesCS5B02G115400 , TraesCS5B02G115400 , TraesCS1A02G309400 , TraesCS1A02G309400 , TraesCS3D02G327700 , TraesCS3D02G327700 , TraesCS3D02G327700 , TraesCS5D02G122800 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS1D02G308800 , TraesCS1D02G308800 , TraesCS6A02G421000 , TraesCS5A02G426500 , TraesCS4B02G130300 , TraesCS5D02G122800 , TraesCS5D02G122800 , TraesCS5A02G138300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
3 Sobic.002G399000 expressed protein -
4 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
5 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.009G223900 protein binding protein, putative, expressed -
7 Sobic.002G085600 - -
8 Sobic.004G202750 - -
9 Sobic.001G350800 - -
10 Sobic.007G114650 - -
11 Sobic.009G147600 pentatricopeptide, putative, expressed -
12 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
14 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
15 Sobic.005G014400 esterase, putative, expressed -
16 Sobic.002G320700 expressed protein -
17 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
18 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
19 Sobic.008G159800 - -
20 Sobic.001G071700 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic005G025400 Sobic005G025400 Sobic010G242000 Sobic010G242000 Sobic005G025400--Sobic010G242000 Sobic003G440500 Sobic003G440500 Sobic005G025400--Sobic003G440500 Sobic002G399000 Sobic002G399000 Sobic005G025400--Sobic002G399000 Sobic006G170800 Sobic006G170800 Sobic005G025400--Sobic006G170800 Sobic001G350300 Sobic001G350300 Sobic005G025400--Sobic001G350300 Sobic009G223900 Sobic009G223900 Sobic005G025400--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic005G025400--Sobic002G085600 Sobic004G202750 Sobic004G202750 Sobic005G025400--Sobic004G202750 Sobic001G350800 Sobic001G350800 Sobic005G025400--Sobic001G350800 Sobic010G242000--Sobic005G025400 Sobic010G242000--Sobic006G170800 Sobic008G159800 Sobic008G159800 Sobic010G242000--Sobic008G159800 Sobic007G114650 Sobic007G114650 Sobic010G242000--Sobic007G114650 Sobic010G242000--Sobic002G399000 Sobic010G242000--Sobic003G440500 Sobic010G242000--Sobic001G350300 Sobic008G134500 Sobic008G134500 Sobic010G242000--Sobic008G134500 Sobic002G320700 Sobic002G320700 Sobic010G242000--Sobic002G320700 Sobic010G249600 Sobic010G249600 Sobic003G440500--Sobic010G249600 Sobic002G377400 Sobic002G377400 Sobic003G440500--Sobic002G377400 Sobic003G440500--Sobic009G223900 Sobic003G440500--Sobic005G025400 Sobic007G185000 Sobic007G185000 Sobic003G440500--Sobic007G185000 Sobic003G440500--Sobic010G242000 Sobic003G308900 Sobic003G308900 Sobic003G440500--Sobic003G308900 Sobic003G440500--Sobic002G399000 Sobic009G181900 Sobic009G181900 Sobic003G440500--Sobic009G181900 Sobic002G399000--Sobic001G350300 Sobic004G350600 Sobic004G350600 Sobic002G399000--Sobic004G350600 Sobic001G104100 Sobic001G104100 Sobic002G399000--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic002G399000--Sobic001G191300 Sobic002G399000--Sobic006G170800 Sobic002G399000--Sobic004G202750 Sobic004G305300 Sobic004G305300 Sobic002G399000--Sobic004G305300 Sobic003G118500 Sobic003G118500 Sobic002G399000--Sobic003G118500 Sobic002G399000--Sobic005G025400 Sobic006G170800--Sobic001G350300 Sobic006G170800--Sobic002G320700 Sobic006G170800--Sobic004G305300 Sobic006G170800--Sobic002G399000 Sobic006G170800--Sobic010G242000 Sobic006G170800--Sobic004G350600 Sobic006G170800--Sobic004G202750 Sobic006G170800--Sobic001G104100 Sobic006G170800--Sobic005G025400 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G350300--Sobic001G104100 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400 Sobic002G001500 Sobic002G001500 Sobic009G223900--Sobic002G001500 Sobic004G181000 Sobic004G181000 Sobic009G223900--Sobic004G181000 Sobic003G362800 Sobic003G362800 Sobic009G223900--Sobic003G362800 Sobic003G155800 Sobic003G155800 Sobic009G223900--Sobic003G155800 Sobic002G398600 Sobic002G398600 Sobic009G223900--Sobic002G398600 Sobic008G103400 Sobic008G103400 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic002G085600--Sobic001G113400 Sobic002G085600--Sobic002G001500 Sobic009G192933 Sobic009G192933 Sobic002G085600--Sobic009G192933 Sobic002G085600--Sobic003G362800 Sobic002G085600--Sobic001G191300 Sobic002G085600--Sobic004G305300 Sobic002G085600--Sobic009G223900 Sobic004G144300 Sobic004G144300 Sobic002G085600--Sobic004G144300 Sobic002G085600--Sobic002G398600 Sobic001G028500 Sobic001G028500 Sobic004G202750--Sobic001G028500 Sobic004G202750--Sobic001G350800 Sobic004G202750--Sobic002G320700 Sobic009G004500 Sobic009G004500 Sobic004G202750--Sobic009G004500 Sobic004G231501 Sobic004G231501 Sobic004G202750--Sobic004G231501 Sobic001G071700 Sobic001G071700 Sobic004G202750--Sobic001G071700 Sobic007G061500 Sobic007G061500 Sobic004G202750--Sobic007G061500 Sobic004G202750--Sobic001G104100 Sobic001G483200 Sobic001G483200 Sobic004G202750--Sobic001G483200 Sobic001G350800--Sobic001G071700 Sobic001G350800--Sobic004G202750 Sobic001G350800--Sobic001G028500 Sobic004G190800 Sobic004G190800 Sobic001G350800--Sobic004G190800 Sobic001G350800--Sobic007G061500 Sobic001G350800--Sobic004G231501 Sobic010G261500 Sobic010G261500 Sobic001G350800--Sobic010G261500 Sobic004G314100 Sobic004G314100 Sobic001G350800--Sobic004G314100 Sobic001G350800--Sobic001G104100
Octagon: transcription factors


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