Gene annotation
Transcriptome id Sobic.001G113400.1
Synonym Sb01g010080
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
seed maturation protein PM41, putative, expressed
UniProt C5WN05
Pfam -
Panther DB PTHR36012 PTHR36012:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21820 : -
RAP-DB (Rice) LOC_Os08g29600.1 : seed maturation protein PM41, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G059280.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362800 - -
2 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
3 Sobic.002G085600 - -
4 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
5 Sobic.004G144300 - -
6 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
7 Sobic.009G223900 protein binding protein, putative, expressed -
8 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G192933 - -
10 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
12 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
13 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
14 Sobic.003G001650 - -
15 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
16 Sobic.001G350800 - -
17 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
18 Sobic.004G305300 - -
19 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
20 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G113400 Sobic001G113400 Sobic003G362800 Sobic003G362800 Sobic001G113400--Sobic003G362800 Sobic002G001500 Sobic002G001500 Sobic001G113400--Sobic002G001500 Sobic002G085600 Sobic002G085600 Sobic001G113400--Sobic002G085600 Sobic009G208000 Sobic009G208000 Sobic001G113400--Sobic009G208000 Sobic004G144300 Sobic004G144300 Sobic001G113400--Sobic004G144300 Sobic003G155800 Sobic003G155800 Sobic001G113400--Sobic003G155800 Sobic009G223900 Sobic009G223900 Sobic001G113400--Sobic009G223900 Sobic004G181000 Sobic004G181000 Sobic001G113400--Sobic004G181000 Sobic009G192933 Sobic009G192933 Sobic001G113400--Sobic009G192933 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic003G362800--Sobic004G144300 Sobic008G103400 Sobic008G103400 Sobic003G362800--Sobic008G103400 Sobic010G000200 Sobic010G000200 Sobic003G362800--Sobic010G000200 Sobic004G173200 Sobic004G173200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic002G001500--Sobic004G173200 Sobic002G085600--Sobic001G113400 Sobic002G085600--Sobic002G001500 Sobic002G085600--Sobic009G192933 Sobic002G085600--Sobic003G362800 Sobic001G191300 Sobic001G191300 Sobic002G085600--Sobic001G191300 Sobic004G305300 Sobic004G305300 Sobic002G085600--Sobic004G305300 Sobic002G085600--Sobic009G223900 Sobic002G085600--Sobic004G144300 Sobic002G398600 Sobic002G398600 Sobic002G085600--Sobic002G398600 Sobic009G208000--Sobic002G001500 Sobic003G040300 Sobic003G040300 Sobic009G208000--Sobic003G040300 Sobic009G208000--Sobic004G181000 Sobic009G208000--Sobic003G362800 Sobic009G208000--Sobic001G113400 Sobic009G160100 Sobic009G160100 Sobic009G208000--Sobic009G160100 Sobic009G208000--Sobic003G155800 Sobic003G150700 Sobic003G150700 Sobic009G208000--Sobic003G150700 Sobic009G208000--Sobic008G103400 Sobic004G310400 Sobic004G310400 Sobic004G144300--Sobic004G310400 Sobic004G144300--Sobic003G362800 Sobic004G144300--Sobic001G113400 Sobic005G048800 Sobic005G048800 Sobic004G144300--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic004G144300--Sobic001G520000 Sobic004G144300--Sobic002G085600 Sobic003G118500 Sobic003G118500 Sobic004G144300--Sobic003G118500 Sobic009G049100 Sobic009G049100 Sobic004G144300--Sobic009G049100 Sobic001G096200 Sobic001G096200 Sobic004G144300--Sobic001G096200 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G253700 Sobic003G253700 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic003G155800--Sobic002G001500 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic009G223900--Sobic002G001500 Sobic009G223900--Sobic004G181000 Sobic009G223900--Sobic003G362800 Sobic009G223900--Sobic003G155800 Sobic009G223900--Sobic002G398600 Sobic009G223900--Sobic008G103400 Sobic001G503700 Sobic001G503700 Sobic009G223900--Sobic001G503700 Sobic009G223900--Sobic001G113400 Sobic003G262600 Sobic003G262600 Sobic009G223900--Sobic003G262600 Sobic004G181000--Sobic002G001500 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic004G181000--Sobic009G223900 Sobic004G181000--Sobic003G155800 Sobic004G181000--Sobic009G208000 Sobic003G251900 Sobic003G251900 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic004G181000--Sobic001G113400 Sobic009G192933--Sobic002G085600 Sobic009G192933--Sobic001G113400 Sobic009G192933--Sobic004G144300 Sobic001G019601 Sobic001G019601 Sobic009G192933--Sobic001G019601 Sobic009G192933--Sobic002G001500 Sobic009G192933--Sobic003G362800 Sobic009G192933--Sobic003G001650 Sobic009G192933--Sobic004G305300 Sobic002G274000 Sobic002G274000 Sobic009G192933--Sobic002G274000
Octagon: transcription factors


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